RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 FLNBO75369 2602 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 H0Y980 276 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 OR3A3P47888 321 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 ZNF2Q9BSG1 426 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 COMMD9Q9P000 198 aa6.59□□□□□ -1.35
CDC42SE2-208ENST00000505065 A0A1W2PRD5 423 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 A0A1W2PRF3 423 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 A0A1W2PRM7 423 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 MEIS3P1A6NDR6 274 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 TIMM23O14925 209 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 EGR2P11161 476 aaPredicted RBP6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 UCP1P25874 307 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 SLC25A42Q86VD7 318 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 OR4A5Q8NH83 315 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 RITA1Q96K30 269 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 OR2D2Q9H210 308 aa6.59□□□□□ -1.36
CDC42SE2-208ENST00000505065 ABCA1O95477 2261 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 RAB3DO95716 219 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 HLA-DRB1P01911 266 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 RELBQ01201 579 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 M0QYG6 137 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 GPR31O00270 319 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 IGF1P05019 195 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 NFYAP23511 347 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 RIPPLY3P57055 190 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 OSR1Q8TAX0 266 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 EAF1Q96JC9 268 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 C1RLQ9NZP8 487 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 GNG12Q9UBI6 72 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 A0A0B4J2A0 478 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 TOR1AO14656 332 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 IGHV4-59P01825 116 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 COX7A1P24310 79 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 HLA-DMAP28067 261 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 TAS2R31P59538 309 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 MRPS15P82914 257 aaKnown RBP6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 PYDC2Q56P42 97 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 RNASE10Q5GAN6 216 aaKnown RBP6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 TOMM40LQ969M1 308 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 PLEKHA2Q9HB19 425 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 CCL28Q9NRJ3 127 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 SHPKQ9UHJ6 478 aa6.58□□□□□ -1.36
CDC42SE2-208ENST00000505065 MOSP00540 346 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 ARPC4P59998 168 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 UBE2KP61086 200 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 PRB3Q04118 309 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 OR56B4Q8NH76 319 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 BEX2Q9BXY8 128 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 DPAGT1Q9H3H5 408 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 WASHC3Q9Y3C0 194 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 CGB1A6NKQ9 187 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 DISC1C4P0D8 188 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 HOXA3O43365 443 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 CDS2O95674 445 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 IGHG2P01859 326 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 GNG10P50151 68 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 SRSF4Q08170 494 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 OR6F1Q8NGZ6 308 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 UBALD1Q8TB05 177 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 SEC22AQ96IW7 307 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 OCEL1Q9H607 264 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 SLC2A9Q9NRM0 540 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 LIN7CQ9NUP9 197 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 BET1LQ9NYM9 111 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 SRRM4A7MD48 611 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 BET1O15155 118 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 HKR1P10072 659 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 SLC25A6P12236 298 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 RPA2P15927 270 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 HLA-GP17693 338 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 F2RP25116 425 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 TMEM187Q14656 261 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 TEX45Q8NA69 505 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 OR51S1Q8NGJ8 323 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 JMJD8Q96S16 334 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 SSX3Q99909 188 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 MARVELD1Q9BSK0 173 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 A0A1W2PPE3 182 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 DUXBA0A1W2PPF3 345 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 M0QZK8 103 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 SNRNP70P08621 437 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 NFYBP25208 207 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 GPR12P47775 334 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 TOMM5Q8N4H5 51 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 OR10X1Q8NGY0 326 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 OR2T10Q8NGZ9 312 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 S1PR3Q99500 378 aa6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 MS4A7Q9GZW8 240 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-208ENST00000505065 MEX3AA1L020 520 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 MPPED1O15442 326 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 TCF21O43680 179 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 IGKV1-16P04430 117 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 RAB13P51153 203 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 RBMS2Q15434 407 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 BSXQ3C1V8 233 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 FOXRED2Q8IWF2 684 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 LYG1Q8N1E2 194 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 SRSF8Q9BRL6 282 aaKnown RBP6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 SERTAD4Q9NUC0 356 aa6.56□□□□□ -1.36
CDC42SE2-208ENST00000505065 COPZ2Q9P299 210 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms