RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GPR61Q9BZJ8 451 aa10.13□□□□□ -0.79
DDX41-204ENST00000504807 TOLLIPQ9H0E2 274 aa10.13□□□□□ -0.79
DDX41-204ENST00000504807 NDUFB11Q9NX14 153 aa10.13□□□□□ -0.79
DDX41-204ENST00000504807 METTL1Q9UBP6 276 aaKnown RBP10.13□□□□□ -0.79
DDX41-204ENST00000504807 VSIG4Q9Y279 399 aa10.13□□□□□ -0.79
DDX41-204ENST00000504807 WASHC3Q9Y3C0 194 aa10.13□□□□□ -0.79
DDX41-204ENST00000504807 PLECQ15149 4684 aaKnown RBP10.13□□□□□ -0.79
DDX41-204ENST00000504807 ERICH4A6NGS2 130 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 IFITM5A6NNB3 132 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 SRRM4A7MD48 611 aaKnown RBP10.12□□□□□ -0.79
DDX41-204ENST00000504807 H7C2Y5 167 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 RBMXL2O75526 392 aaKnown RBP10.12□□□□□ -0.79
DDX41-204ENST00000504807 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 CRYGBP07316 175 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 OR5H8P0DN80 308 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 PSMA1P25786 263 aaKnown RBP10.12□□□□□ -0.79
DDX41-204ENST00000504807 ZNF616Q08AN1 781 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 TRAM1Q15629 374 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 ZNF660Q6AZW8 331 aaPredicted RBP10.12□□□□□ -0.79
DDX41-204ENST00000504807 ZNF367Q7RTV3 350 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 HAPLN4Q86UW8 402 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 LFNGQ8NES3 379 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 MS4A10Q96PG2 267 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 CABLES2Q9BTV7 478 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 RIMS4Q9H426 269 aaPredicted RBP10.12□□□□□ -0.79
DDX41-204ENST00000504807 KIAA1456Q9P272 454 aa10.12□□□□□ -0.79
DDX41-204ENST00000504807 FOXA2Q9Y261 457 aaPredicted RBP10.12□□□□□ -0.79
DDX41-204ENST00000504807 A0A075B6Q4 140 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 TRAV1-2A0A0B4J238 106 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 M0R1X1 148 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 BET1O15155 118 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 FABP7O15540 132 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 HSPA12AO43301 675 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 SLC25A17O43808 307 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 OR8U9P0C7N5 309 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 C22orf42Q6IC83 251 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 TMEM65Q6PI78 240 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 PPP1R27Q86WC6 154 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 OR56B1Q8NGI3 324 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 OR10R2Q8NGX6 335 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 RAB3CQ96E17 227 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 CHCHD6Q9BRQ6 235 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 RAB22AQ9UL26 194 aa10.11□□□□□ -0.79
DDX41-204ENST00000504807 TRBV6-7A0A0A0MS04 114 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 TRDV1A0A1B0GX56 115 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 TFAP2AP05549 437 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 GSTP1P09211 210 aaKnown RBP10.1□□□□□ -0.79
DDX41-204ENST00000504807 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
DDX41-204ENST00000504807 OR8U8P0C7N1 319 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 HIST1H1DP16402 221 aaKnown RBP10.1□□□□□ -0.79
DDX41-204ENST00000504807 MC5RP33032 325 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 PLGLAQ15195 96 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 UNQ5815/PRO19632Q6UWF5 114 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 OR4A4PQ8NGN8 299 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 EDARADDQ8WWZ3 215 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 ARPC1AQ92747 370 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 RHOVQ96L33 236 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 OR2D2Q9H210 308 aa10.1□□□□□ -0.79
DDX41-204ENST00000504807 ZNF256Q9Y2P7 627 aaPredicted RBP10.1□□□□□ -0.79
DDX41-204ENST00000504807 LINC00473A8K010 186 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 RAMP3O60896 148 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 RBBP9O75884 186 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 SPNP16150 400 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 RAB3BP20337 219 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 RPS16P62249 146 aaKnown RBP10.09□□□□□ -0.79
DDX41-204ENST00000504807 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 SPARTQ8N0X7 666 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 GRPEL2Q8TAA5 225 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 ABHD5Q8WTS1 349 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 DDB2Q92466 427 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 RNF167Q9H6Y7 350 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 SLC35D1Q9NTN3 355 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 ADAM30Q9UKF2 790 aa10.09□□□□□ -0.79
DDX41-204ENST00000504807 LINC01619G3V211 115 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 OVOL1O14753 267 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 ATP6V1G2O95670 118 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 FXYD3Q14802 87 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 AKIRIN2Q53H80 203 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 ACTBL2Q562R1 376 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 UBE2UQ5VVX9 321 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 PDPNQ86YL7 162 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 H1FOOQ8IZA3 346 aaPredicted RBP10.08□□□□□ -0.8
DDX41-204ENST00000504807 BVESQ8NE79 360 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 OR5T1Q8NG75 326 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 RNF5Q99942 180 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 TXNL4BQ9NX01 149 aaKnown RBP10.08□□□□□ -0.8
DDX41-204ENST00000504807 ZNF221Q9UK13 617 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 RAB26Q9ULW5 256 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 MGAT4AQ9UM21 535 aa10.08□□□□□ -0.8
DDX41-204ENST00000504807 KIAA1109Q2LD37 5005 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 TRIM64CA6NLI5 447 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 J3QRK9 145 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 SSX5O60225 188 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 JTBO76095 146 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 SPDEFO95238 335 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 IGLV2-14P01704 120 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 TRBV12-3P01733 135 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 CLEC2LP0C7M8 214 aa10.07□□□□□ -0.8
DDX41-204ENST00000504807 APELAP0DMC3 54 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms