RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 DOCK11Q5JSL3 2073 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 TRGV10A0A0A0MS01 117 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 TRAV20A0A0B4J274 112 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 ZNF729A6NN14 1252 aaPredicted RBP8.39□□□□□ -1.07
USP17L28-201ENST00000504543 SMAD7O15105 426 aaKnown RBP8.39□□□□□ -1.07
USP17L28-201ENST00000504543 GPR37O15354 613 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 TNFSF12O43508 249 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 FOXH1O75593 365 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 MMP9P14780 707 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 PPP1CCP36873 323 aaKnown RBP8.39□□□□□ -1.07
USP17L28-201ENST00000504543 P2RY1P47900 373 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 EDDM3BP56851 147 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 AVPI1Q5T686 147 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 ZNF66Q6ZN08 573 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 TEX29Q8N6K0 151 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 OR52M1Q8NGK5 317 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 OR51H1Q8NH63 302 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 ZNF471Q9BX82 626 aaPredicted RBP8.39□□□□□ -1.07
USP17L28-201ENST00000504543 DCAF16Q9NXF7 216 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 LPAR3Q9UBY5 353 aa8.39□□□□□ -1.07
USP17L28-201ENST00000504543 LSM5Q9Y4Y9 91 aaKnown RBP8.39□□□□□ -1.07
USP17L28-201ENST00000504543 ABCA2Q9BZC7 2435 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 A0A1B0GU03 582 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 MSGN1A6NI15 193 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 ADAM20O43506 726 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 SPDEFO95238 335 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 GYPAP02724 150 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 HKR1P10072 659 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 TPT1P13693 172 aaKnown RBP8.38□□□□□ -1.07
USP17L28-201ENST00000504543 NKX2-1P43699 371 aaPredicted RBP8.38□□□□□ -1.07
USP17L28-201ENST00000504543 RAB7AP51149 207 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 LOXL3P58215 753 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 EIF5AP63241 154 aaKnown RBP8.38□□□□□ -1.07
USP17L28-201ENST00000504543 MEF2CQ06413 473 aaPredicted RBP8.38□□□□□ -1.07
USP17L28-201ENST00000504543 MORN2Q502X0 79 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 GPR157Q5UAW9 335 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 FAM219AQ8IW50 185 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 OR10A7Q8NGE5 316 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 NEIL1Q96FI4 390 aaPredicted RBP8.38□□□□□ -1.07
USP17L28-201ENST00000504543 C5orf30Q96GV9 206 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 GPHA2Q96T91 129 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 HSD17B10Q99714 261 aaKnown RBP8.38□□□□□ -1.07
USP17L28-201ENST00000504543 AGMATQ9BSE5 352 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 MED9Q9NWA0 146 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 TAS2R3Q9NYW6 316 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 GNG12Q9UBI6 72 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 GAB2Q9UQC2 676 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 RCL1Q9Y2P8 373 aaKnown RBP8.38□□□□□ -1.07
USP17L28-201ENST00000504543 LINC00312Q9Y6C7 94 aa8.38□□□□□ -1.07
USP17L28-201ENST00000504543 KBTBD11-OT1A0A1B0GTJ5 212 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 hADV38S2A0JD32 116 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 J3QLI3 93 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 PITX3O75364 302 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 ATG12O94817 140 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 SCGB1D2O95969 90 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 IGKV1-39P01597 117 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 GAPDHP04406 335 aaKnown RBP8.37□□□□□ -1.07
USP17L28-201ENST00000504543 IGKV1D-39P04432 117 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 MSMBP08118 114 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 SELLP14151 372 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
USP17L28-201ENST00000504543 RPL12P30050 165 aaKnown RBP8.37□□□□□ -1.07
USP17L28-201ENST00000504543 C17orf58Q2M2W7 97 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 ALKAL2Q6UX46 152 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 TCF23Q7RTU1 214 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 FAM216BQ8N7L0 139 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.37□□□□□ -1.07
USP17L28-201ENST00000504543 CCL13Q99616 98 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 DCTN5Q9BTE1 182 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 SLC25A32Q9H2D1 315 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 GFOD1Q9NXC2 390 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 COA4Q9NYJ1 87 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 CLN8Q9UBY8 286 aa8.37□□□□□ -1.07
USP17L28-201ENST00000504543 IGHV3-43A0A0B4J1X8 118 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 A0A1B0GW55 424 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 FAM157AC9JC47 383 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 TMPRSS2O15393 492 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 GPR137BO60478 399 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 NMBP08949 121 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DUX4L2P0CJ85 424 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DUX4L3P0CJ86 424 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DUX4L4P0CJ87 422 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DUX4L5P0CJ88 424 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DUX4L6P0CJ89 424 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DUX4L7P0CJ90 424 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 IGHV3-43DP0DP04 118 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 ID3Q02535 119 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 Q3ZCU0 254 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 ZNF585BQ52M93 769 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DUX4L9Q6RFH8 374 aaPredicted RBP8.36□□□□□ -1.07
USP17L28-201ENST00000504543 FOXRED2Q8IWF2 684 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 MAPK1IP1LQ8NDC0 245 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 DMBX1Q8NFW5 382 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 OR8B3Q8NGG8 313 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 RFESDQ8TAC1 157 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 CD300LFQ8TDQ1 290 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 TMEM186Q96B77 213 aa8.36□□□□□ -1.07
USP17L28-201ENST00000504543 OR8B2Q96RD0 313 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms