RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 ZNF22P17026 224 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 RPS12P25398 132 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 ERVS71-1P61550 626 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 GTF2BQ00403 316 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 AESQ08117 197 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 SRSF6Q13247 344 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 HENMT1Q5T8I9 393 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 HACD4Q5VWC8 232 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 SYPL2Q5VXT5 272 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 SMARCD3Q6STE5 483 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 DOLPP1Q86YN1 238 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 SLC37A2Q8TED4 501 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 TESCQ96BS2 214 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 PHB2Q99623 299 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 NIPSNAP1Q9BPW8 284 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 AIF1LQ9BQI0 150 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 XPNPEP1Q9NQW7 623 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 SPANXA1Q9NS26 97 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 CMTM6Q9NX76 183 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 MMACHCQ9Y4U1 282 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 ALG5Q9Y673 324 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 EIF3AQ14152 1382 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 LTBP4Q8N2S1 1624 aa2.35□□□□□ -2.03
TRAPPC13-205ENST00000504243 ZFYVE9O95405 1425 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 ARAP3Q8WWN8 1544 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 KCNK1O00180 336 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 FADS1O60427 444 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 NOS1APO75052 506 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 LTAP01374 205 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 TCRBP04435 133 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 PPP1CCP36873 323 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 PSME3P61289 254 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 RPL19P84098 196 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 TFAMQ00059 246 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 TNFRSF9Q07011 255 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 CST9Q5W186 159 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 EBLN2Q6P2I7 272 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 PXT1Q8NFP0 134 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 OR1M1Q8NGA1 313 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 OR51D1Q8NGF3 324 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 RNASE11Q8TAA1 199 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 RASSF5Q8WWW0 418 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 ASB13Q8WXK3 278 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 MAFIPQ8WZ33 124 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 RAB8BQ92930 207 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 DGCR14Q96DF8 476 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 TCEAL4Q96EI5 215 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 SMIM12Q96EX1 92 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 TSC22D3Q99576 134 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 DDA1Q9BW61 102 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 MAP1LC3AQ9H492 121 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 ZNF286AQ9HBT8 521 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 TMEM216Q9P0N5 145 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 LINC00588Q9Y4M8 146 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 SNX10Q9Y5X0 201 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 KMT2EQ8IZD2 1858 aa2.34□□□□□ -2.03
TRAPPC13-205ENST00000504243 CLUHO75153 1309 aa2.34□□□□□ -2.04
TRAPPC13-205ENST00000504243 CCDC171Q6TFL3 1326 aa2.34□□□□□ -2.04
TRAPPC13-205ENST00000504243 IGHV3OR15-7A0A075B7D8 119 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 ZNF878C9JN71 531 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 M0QYV0 167 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 M0QZK8 103 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 PSMD12O00232 456 aaPredicted RBP2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR2B3O76000 313 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR4A8P0C604 315 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 CTSEP14091 401 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 ORM2P19652 201 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 C1QTNF8P60827 252 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 KRR1Q13601 381 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 C1DQ13901 141 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 CLEC12BQ2HXU8 276 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 BRMS1LQ5PSV4 323 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 SCXQ7RTU7 201 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 UBL4BQ8N7F7 174 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 GPR32P1Q8NGA4 272 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR10D4PQ8NGN7 298 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR5C1Q8NGR4 320 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR2V1Q8NHB1 315 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 OR5K1Q8NHB7 308 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 BORCS5Q969J3 196 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 TLCD1Q96CP7 247 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 PRAP1Q96NZ9 151 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 MED18Q9BUE0 208 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 GINS2Q9Y248 185 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 CPDO75976 1380 aa2.33□□□□□ -2.04
TRAPPC13-205ENST00000504243 PLXNB1O43157 2135 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 IGKV1-12A0A0C4DH73 117 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 A8MWP6 167 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 MIF4GDA9UHW6 222 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 G3V3Q6 166 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 TSTD3H0UI37 97 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 IFNA21P01568 189 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 IGKV1D-12P01611 117 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 IFNA16P05015 189 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 CD99P14209 185 aa2.32□□□□□ -2.04
TRAPPC13-205ENST00000504243 RPL12P30050 165 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms