RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 METTL1Q9UBP6 276 aaKnown RBP13.19□□□□□ -0.3
MATR3-208ENST00000504045 ETV7Q9Y603 341 aa13.19□□□□□ -0.3
MATR3-208ENST00000504045 TRAV41A0A0B4J266 112 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 TRIM64CA6NLI5 447 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 SCGNO76038 276 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 PTHLHP12272 177 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 RPS19P39019 145 aaKnown RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 CDX1P47902 265 aaPredicted RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 SCAND1P57086 179 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 GNG2P59768 71 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 RPS16P62249 146 aaKnown RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 ECSCRQ19T08 205 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 C19orf54Q5BKX5 351 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 PDPNQ86YL7 162 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 RNF5Q99942 180 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 TRAV18A0A075B6X5 111 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 SOX15O60248 233 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 IGLV1-40P01703 118 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 APOA2P02652 100 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 OR5H8P0DN80 308 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 NFYAP23511 347 aaPredicted RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 SLC6A1P30531 599 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 MYCNOSP40205 109 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 KIAA0141Q14154 515 aaPredicted RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 MYOZ3Q8TDC0 251 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 RCC1LQ96I51 464 aaKnown RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 FAM103A1Q9BTL3 118 aaKnown RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 DCSTAMPQ9H295 470 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 VCX3AQ9NNX9 186 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 AURKAIP1Q9NWT8 199 aaPredicted RBP13.18□□□□□ -0.3
MATR3-208ENST00000504045 SPATA2Q9UM82 520 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 A3GALT2U3KPV4 340 aa13.18□□□□□ -0.3
MATR3-208ENST00000504045 SLC25A17O43808 307 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 CA2P00918 260 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 IGLV2-23P01705 113 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 PITPNAQ00169 270 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 ZNF660Q6AZW8 331 aaPredicted RBP13.17□□□□□ -0.3
MATR3-208ENST00000504045 GVQW1Q8N7I0 195 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 MINDY2Q8NBR6 621 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 BVESQ8NE79 360 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 CASTOR1Q8WTX7 329 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 FLYWCH2Q96CP2 140 aaKnown RBP13.17□□□□□ -0.3
MATR3-208ENST00000504045 NECAP2Q9NVZ3 263 aa13.17□□□□□ -0.3
MATR3-208ENST00000504045 LINC00473A8K010 186 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 CCL24O00175 119 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 CRIP2P52943 208 aaPredicted RBP13.16□□□□□ -0.3
MATR3-208ENST00000504045 SSBP2P81877 361 aaPredicted RBP13.16□□□□□ -0.3
MATR3-208ENST00000504045 CNIH2Q6PI25 160 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 DDB2Q92466 427 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 TSNAXQ99598 290 aaKnown RBP13.16□□□□□ -0.3
MATR3-208ENST00000504045 GNB4Q9HAV0 340 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 ANXA10Q9UJ72 324 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 NUBP2Q9Y5Y2 271 aa13.16□□□□□ -0.3
MATR3-208ENST00000504045 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 A0A1W2PN81 502 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 SPDEFO95238 335 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 FCER2P06734 321 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 IGKV1-13P0DP09 117 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 HOXD3P31249 432 aaPredicted RBP13.15□□□□□ -0.3
MATR3-208ENST00000504045 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
MATR3-208ENST00000504045 CHRNA7P36544 502 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 KRTAP10-11P60412 298 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 NCS1P62166 190 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 ZNF491Q8N8L2 437 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 C4orf3Q8WVX3 66 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 FUNDC2Q9BWH2 189 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 AUNIPQ9H7T9 357 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 OR2W1Q9Y3N9 320 aa13.15□□□□□ -0.3
MATR3-208ENST00000504045 SRRM4A7MD48 611 aaKnown RBP13.14□□□□□ -0.31
MATR3-208ENST00000504045 ARPC1BO15143 372 aaKnown RBP13.14□□□□□ -0.31
MATR3-208ENST00000504045 IGLV2-14P01704 120 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 CRYGBP07316 175 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 SMIM18P0DKX4 95 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 RAB9AP51151 201 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 RAB25P57735 213 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 PJVKQ0ZLH3 352 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 PPP1R27Q86WC6 154 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 HARBI1Q96MB7 349 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 OR5B12Q96R08 314 aa13.14□□□□□ -0.31
MATR3-208ENST00000504045 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 A6NJ64 397 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 HLA-DQB1P01920 261 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 CTXN2P0C2S0 81 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 LUMP51884 338 aaPredicted RBP13.13□□□□□ -0.31
MATR3-208ENST00000504045 TMEM177Q53S58 311 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 TMEM65Q6PI78 240 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 UNQ5815/PRO19632Q6UWF5 114 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 ZNF562Q6V9R5 426 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 CROCCP3Q8IVE0 287 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 ZNF645Q8N7E2 425 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 LFNGQ8NES3 379 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 BEST4Q8NFU0 473 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 ARPC1AQ92747 370 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 FOXA2Q9Y261 457 aaPredicted RBP13.13□□□□□ -0.31
MATR3-208ENST00000504045 SORL1Q92673 2214 aa13.13□□□□□ -0.31
MATR3-208ENST00000504045 MEIS3P1A6NDR6 274 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms