RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 CNPY1Q3B7I2 92 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 PYDC2Q56P42 97 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 AWAT1Q58HT5 328 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 RNASE10Q5GAN6 216 aaKnown RBP8.88□□□□□ -0.99
VCAN-205ENST00000503923 TMEM17Q86X19 198 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 ZBTB34Q8NCN2 500 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 BORCS5Q969J3 196 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 MOB3AQ96BX8 217 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 C5orf30Q96GV9 206 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 PRSS22Q9GZN4 317 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 SLC5A7Q9GZV3 580 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 RBMX2Q9Y388 322 aaKnown RBP8.88□□□□□ -0.99
VCAN-205ENST00000503923 MMP24Q9Y5R2 645 aa8.88□□□□□ -0.99
VCAN-205ENST00000503923 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 NCBP2LA6PVI3 153 aaKnown RBP8.87□□□□□ -0.99
VCAN-205ENST00000503923 M0QYG6 137 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 AMY1AP04745 511 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 AMY2AP04746 511 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 RRASP10301 218 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 MDKP21741 143 aaPredicted RBP8.87□□□□□ -0.99
VCAN-205ENST00000503923 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
VCAN-205ENST00000503923 BLCAPP62952 87 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 CBX3Q13185 183 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 ZNF79Q15937 498 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 STEAP1BQ6NZ63 245 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 C11orf88Q6PI97 169 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 C12orf54Q6X4T0 127 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 PDPNQ86YL7 162 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 Q8N2B8 174 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 ARRDC1Q8N5I2 433 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 C5orf56Q8N8D9 126 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 OR2T6Q8NHC8 308 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 LINC01006Q8NI28 216 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 HSD17B10Q99714 261 aaKnown RBP8.87□□□□□ -0.99
VCAN-205ENST00000503923 RNF5Q99942 180 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 THAP7Q9BT49 309 aaPredicted RBP8.87□□□□□ -0.99
VCAN-205ENST00000503923 TINAGL1Q9GZM7 467 aaPredicted RBP8.87□□□□□ -0.99
VCAN-205ENST00000503923 ZNF702PQ9H963 129 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 CCL28Q9NRJ3 127 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 SLC35D1Q9NTN3 355 aa8.87□□□□□ -0.99
VCAN-205ENST00000503923 RAB3DO95716 219 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 AKAIN1P0CW23 69 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 F2RL1P55085 397 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 LINC00205P59089 165 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 MEF2DQ14814 521 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 MMDQ15546 238 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 RTL8BQ17RB0 113 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 ABCA11PQ4W5N1 156 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 ARSJQ5FYB0 599 aaPredicted RBP8.86□□□□□ -0.99
VCAN-205ENST00000503923 LPCAT3Q6P1A2 487 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 ZNF66Q6ZN08 573 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 LINC00299Q6ZSB3 139 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 Q8N402 240 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 Q8N9W7 124 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 DDB2Q92466 427 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 RBMXL1Q96E39 390 aaKnown RBP8.86□□□□□ -0.99
VCAN-205ENST00000503923 RASL11BQ9BPW5 248 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 SRRQ9GZT4 340 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 FXYD6Q9H0Q3 95 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 PLSCR3Q9NRY6 295 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 PRELID3BQ9Y3B1 194 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
VCAN-205ENST00000503923 ANKRD20A5PA0PJZ0 165 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 LINC00473A8K010 186 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 DISC1C4P0D8 188 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 NBR2O15453 112 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 IGKV1-16P04430 117 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 GNRHRP30968 328 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 UCP3P55916 312 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 RPS16P62249 146 aaKnown RBP8.85□□□□□ -0.99
VCAN-205ENST00000503923 EIF4EBP1Q13541 118 aaPredicted RBP8.85□□□□□ -0.99
VCAN-205ENST00000503923 C9orf152Q5JTZ5 239 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 ZNF818PQ6ZRF7 136 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 KCTD9Q7L273 389 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 CMTM1Q8IZ96 169 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 MFSD4AQ8N468 514 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 FAM71E2Q8N5Q1 922 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 BVESQ8NE79 360 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 NPBQ8NG41 125 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 OR4D10Q8NGI6 311 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 TCTEX1D2Q8WW35 142 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 TRIM63Q969Q1 353 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 FLYWCH2Q96CP2 140 aaKnown RBP8.85□□□□□ -0.99
VCAN-205ENST00000503923 RITA1Q96K30 269 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 TSNAXQ99598 290 aaKnown RBP8.85□□□□□ -0.99
VCAN-205ENST00000503923 LIN7CQ9NUP9 197 aaKnown RBP8.85□□□□□ -0.99
VCAN-205ENST00000503923 KIAA1456Q9P272 454 aa8.85□□□□□ -0.99
VCAN-205ENST00000503923 SH2D7A6NKC9 451 aaPredicted RBP8.84□□□□□ -0.99
VCAN-205ENST00000503923 GPR31O00270 319 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 TNFSF12O43508 249 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 FCGR3BO75015 233 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 NDUFA3O95167 84 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 SPDEFO95238 335 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 CNTFRP26992 372 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 S100GP29377 79 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 KIR2DS2P43631 304 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 VDAC2P45880 294 aaPredicted RBP8.84□□□□□ -0.99
VCAN-205ENST00000503923 PROK1P58294 105 aa8.84□□□□□ -0.99
VCAN-205ENST00000503923 AP3S2P59780 193 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms