RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 OR5B12Q96R08 314 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 NMNAT3Q96T66 252 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 PARD6GQ9BYG4 376 aaPredicted RBP4.33□□□□□ -1.72
HTT-202ENST00000502820 KRTAP3-3Q9BYR6 98 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 KRTAP3-2Q9BYR7 98 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 C5orf66Q9H5L9 145 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 ZNF665Q9H7R5 613 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 Q9N2K0 584 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 FZR1Q9UM11 496 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 PUS1Q9Y606 427 aaKnown RBP eCLIP4.33□□□□□ -1.72
HTT-202ENST00000502820 SOX21Q9Y651 276 aaPredicted RBP4.33□□□□□ -1.72
HTT-202ENST00000502820 MALRD1Q5VYJ5 2156 aa4.33□□□□□ -1.72
HTT-202ENST00000502820 TRAV39A0A0B4J263 110 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 LOC102725191A0A1B0GVB3 256 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 MDFIC2A0A1B0GVS7 189 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 C20orf202A1L168 122 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 CRYM-AS1A6NIL9 109 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 TMEM250H0YL14 139 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 H0YL77 283 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 GEMIN2O14893 280 aaKnown RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 AGPAT2O15120 278 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 HOXA3O43365 443 aaPredicted RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 CIDEAO60543 219 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 VAMP5O95183 116 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 AMBPP02760 352 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 TRGC2P03986 189 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 RNASE1P07998 156 aaKnown RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 ASAH2BP0C7U1 165 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 RD3LP0DJH9 198 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 ARR3P36575 388 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 UCP3P55916 312 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 ARF6P62330 175 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 MRPS11P82912 194 aaKnown RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 QRFPP83859 136 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 HERPUD1Q15011 391 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 ZNF74Q16587 644 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 MPV17LQ2QL34 196 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 COX19Q49B96 90 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 OXLD1Q5BKU9 147 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 RUSC1-AS1Q66K80 236 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 SSX7Q7RTT5 188 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 AAED1Q7RTV5 226 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 CENPVQ7Z7K6 275 aaPredicted RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 WDFY1Q8IWB7 410 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 MRPL41Q8IXM3 137 aaKnown RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 LGI3Q8N145 548 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 JAGN1Q8N5M9 183 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 LRRC75AQ8NAA5 344 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 OR4B1Q8NGF8 309 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 TMEM230Q96A57 120 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 PINX1Q96BK5 328 aaKnown RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 C10orf35Q96D05 121 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
HTT-202ENST00000502820 WWC2-AS2Q96NR7 200 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 TECTBQ96PL2 329 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 MIEN1Q9BRT3 115 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 CABLES2Q9BTV7 478 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 SNHG12Q9BXW3 62 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 CRLF2Q9HC73 371 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 G6PC2Q9NQR9 355 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 GPR173Q9NS66 373 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 B3GAT1Q9P2W7 334 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 NAT8Q9UHE5 227 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 RNF114Q9Y508 228 aa4.32□□□□□ -1.72
HTT-202ENST00000502820 VWFP04275 2813 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 A0A096LPE4 126 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 IGHV1-18A0A0C4DH31 117 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 LOC102723971A0A1B0GUV8 181 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 TMEM238LA0A1B0GVL6 79 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 LOC107986453A0A1B0GWG9 222 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 A0A1W2PPZ6 126 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 MAP1LC3B2A6NCE7 125 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 MEIS3P1A6NDR6 274 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 TRAF3IP2O43734 574 aaPredicted RBP4.31□□□□□ -1.72
HTT-202ENST00000502820 OR6A2O95222 327 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 AHSA1O95433 338 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 IGLV1-44P01699 117 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 PGA3P0DJD8 388 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 OR13C7P0DN81 318 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 ESDP10768 282 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 NR2C1P13056 603 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 SELEP16581 610 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 ZNF43P17038 809 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 AMY2BP19961 511 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 DTYMKP23919 212 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 CDKN2AP42771 156 aaKnown RBP4.31□□□□□ -1.72
HTT-202ENST00000502820 TAS2R30P59541 319 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 BPIFB3P59826 476 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 KRTAP10-3P60369 221 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 ERVFRD-1P60508 538 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 CTXN1P60606 82 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 SUPT4H1P63272 117 aaKnown RBP4.31□□□□□ -1.72
HTT-202ENST00000502820 SERF2P84101 59 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 TGFBR3Q03167 851 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 CD69Q07108 199 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 EIF2B1Q14232 305 aaKnown RBP4.31□□□□□ -1.72
HTT-202ENST00000502820 OR8B8Q15620 311 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 PCK2Q16822 640 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 ANKRD55Q3KP44 614 aa4.31□□□□□ -1.72
HTT-202ENST00000502820 C3orf36Q3SXR2 165 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms