RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ST13P4Q8IZP2 240 aaPredicted RBP0.37□□□□□ -2.35
SMAD1-203ENST00000502342 DAND5Q8N907 189 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 SMCR5Q8TEV8 140 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 TMA16Q96EY4 203 aaKnown RBP0.37□□□□□ -2.35
SMAD1-203ENST00000502342 UGT2B28Q9BY64 529 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 NKX6-2Q9C056 277 aaPredicted RBP0.37□□□□□ -2.35
SMAD1-203ENST00000502342 VCX3BQ9H321 246 aa0.37□□□□□ -2.35
SMAD1-203ENST00000502342 TECTAO75443 2155 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 BAZ2BQ9UIF8 2168 aaKnown RBP0.36□□□□□ -2.35
SMAD1-203ENST00000502342 H0YC42 278 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 SULT1C2O00338 296 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 MRASO14807 208 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 PLA2G10O15496 165 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 SGCEO43556 437 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 UGT2B11O75310 529 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 CIAO1O76071 339 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 TNFAIP8O95379 198 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 ASS1P00966 412 aaKnown RBP0.36□□□□□ -2.35
SMAD1-203ENST00000502342 AGTR1P30556 359 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 ALDH3A1P30838 453 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 OR10J1P30954 320 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 NUP62P37198 522 aaPredicted RBP0.36□□□□□ -2.35
SMAD1-203ENST00000502342 IFNGR2P38484 337 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 RPL27AP46776 148 aaKnown RBP0.36□□□□□ -2.35
SMAD1-203ENST00000502342 GABRA2P47869 451 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 PSMD7P51665 324 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 EMP1P54849 157 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 HERVK_113P63121 156 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 ELOBQ15370 118 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 XKRXQ6PP77 449 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 LYZL1Q6UWQ5 148 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 ZNF705AQ6ZN79 300 aaPredicted RBP0.36□□□□□ -2.35
SMAD1-203ENST00000502342 ATP5L2Q7Z4Y8 100 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 SPATA12Q7Z6I5 190 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 LFNGQ8NES3 379 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 SLC7A6Q92536 515 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 TMEM208Q9BTX3 173 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 POLR3HQ9Y535 204 aaPredicted RBP0.36□□□□□ -2.35
SMAD1-203ENST00000502342 REREQ9P2R6 1566 aa0.36□□□□□ -2.35
SMAD1-203ENST00000502342 KIAA0232Q92628 1395 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 COPEO14579 308 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 ORC5O43913 435 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 CST4P01036 141 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 LIMS3P0CW19 117 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 LIMS4P0CW20 117 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 CRATP43155 626 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 AQP4P55087 323 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 RBM11P57052 281 aaKnown RBP0.35□□□□□ -2.35
SMAD1-203ENST00000502342 STX3Q13277 289 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 MOGQ16653 247 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 EXOC3L4Q17RC7 722 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 TMEM249Q2WGJ8 235 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 LRRC34Q8IZ02 419 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 C15orf53Q8NAA6 179 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 OR1L8Q8NGR8 309 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 OR13C8Q8NGS7 320 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 CCDC124Q96CT7 223 aaKnown RBP0.35□□□□□ -2.35
SMAD1-203ENST00000502342 TMEM56Q96MV1 263 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 NMNAT3Q96T66 252 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 UBQLN4Q9NRR5 601 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 MRM2Q9UI43 246 aaKnown RBP0.35□□□□□ -2.35
SMAD1-203ENST00000502342 ENPP5Q9UJA9 477 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.35□□□□□ -2.35
SMAD1-203ENST00000502342 TIMM9Q9Y5J7 89 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 CPAMD8Q8IZJ3 1885 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 ARFGEF3Q5TH69 2177 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 CACNA1BQ00975 2339 aa0.35□□□□□ -2.35
SMAD1-203ENST00000502342 FLT4P35916 1363 aa0.34□□□□□ -2.35
SMAD1-203ENST00000502342 F5H5K5 113 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 GOLGA8RI6L899 631 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 SCN2BO60939 215 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 PVALBP20472 110 aaPredicted RBP0.34□□□□□ -2.36
SMAD1-203ENST00000502342 CFL1P23528 166 aaKnown RBP0.34□□□□□ -2.36
SMAD1-203ENST00000502342 PSMB8P28062 276 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 CA5AP35218 305 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 REG1BP48304 166 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 CARD18P57730 90 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 TPI1P60174 286 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 DAD1P61803 113 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 AP1S1P61966 158 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 ARHGAP11BQ3KRB8 267 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 MESTQ5EB52 335 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 GID4Q8IVV7 300 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 Q8N2B8 174 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 TMEM86AQ8N2M4 240 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 PACRGLQ8N7B6 248 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 C12orf43Q96C57 262 aaKnown RBP0.34□□□□□ -2.36
SMAD1-203ENST00000502342 LRRC45Q96CN5 670 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 TLCD1Q96CP7 247 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 FAM210AQ96ND0 272 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 SERPINB11Q96P15 392 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 OR7D2Q96RA2 312 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 TTTY13Q9BZ97 58 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 TMEM222Q9H0R3 208 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 OR51B6Q9H340 312 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 CHD5Q8TDI0 1954 aa0.34□□□□□ -2.36
SMAD1-203ENST00000502342 NPATQ14207 1427 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 TRAV8-1A0A0A6YYK1 113 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 IGHV1-18A0A0C4DH31 117 aa0.33□□□□□ -2.36
SMAD1-203ENST00000502342 TRAPPC13A5PLN9 417 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms