RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RBM11P57052 281 aaKnown RBP0.59□□□□□ -2.31
SMC4-227ENST00000497984 SMAGPQ0VAQ4 97 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 ZNHIT3Q15649 155 aaPredicted RBP0.59□□□□□ -2.31
SMC4-227ENST00000497984 OR10K2Q6IF99 312 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 BOD1L2Q8IYS8 172 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 RIBC1Q8N443 379 aaPredicted RBP0.59□□□□□ -2.31
SMC4-227ENST00000497984 C17orf78Q8N4C9 275 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 OR8B12Q8NGG6 310 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 STOML3Q8TAV4 291 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 SMCR5Q8TEV8 140 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 PPCDCQ96CD2 204 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 TLCD1Q96CP7 247 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 SMIM12Q96EX1 92 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 EIF5A2Q9GZV4 153 aaKnown RBP0.59□□□□□ -2.31
SMC4-227ENST00000497984 MS4A12Q9NXJ0 267 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.32
SMC4-227ENST00000497984 ARHGAP32A7KAX9 2087 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 ZNF638Q14966 1978 aaKnown RBP0.58□□□□□ -2.32
SMC4-227ENST00000497984 IGKV2-40A0A087WW87 121 aaPredicted RBP0.58□□□□□ -2.32
SMC4-227ENST00000497984 METTL15A6NJ78 407 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 SMLR1H3BR10 107 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 M0R381 172 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 COPEO14579 308 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 ZNF737O75373 536 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 NDUFB2O95178 105 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 IGKV2D-40P01614 121 aaPredicted RBP0.58□□□□□ -2.32
SMC4-227ENST00000497984 ATP5G1P05496 136 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 UCHL1P09936 223 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 CRATP43155 626 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 H2BFSP57053 126 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 SLAMF1Q13291 335 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 LRRC26Q2I0M4 334 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 FAM45BPQ6NSW5 357 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 LRRC34Q8IZ02 419 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 OR51T1Q8NGJ9 327 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 OR5AK3PQ8NH89 298 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 Q8WTZ3 238 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 SFRP2Q96HF1 295 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 Q96M85 177 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 TTTY13Q9BZ97 58 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 TREM1Q9NP99 234 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 C1orf109Q9NX04 203 aa0.58□□□□□ -2.32
SMC4-227ENST00000497984 KLK5Q9Y337 293 aaPredicted RBP0.58□□□□□ -2.32
SMC4-227ENST00000497984 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.58□□□□□ -2.325e-47■■■■■ 274.1
SMC4-227ENST00000497984 POLR3HQ9Y535 204 aaPredicted RBP0.58□□□□□ -2.32
SMC4-227ENST00000497984 NYNRINQ9P2P1 1898 aaKnown RBP0.58□□□□□ -2.32
SMC4-227ENST00000497984 CCDC88CQ9P219 2028 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 IGHV3-64A0A075B6Q5 118 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 K7ERQ8 282 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 CXCL2P19875 107 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 CXCL3P19876 107 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 CFL1P23528 166 aaKnown RBP0.57□□□□□ -2.32
SMC4-227ENST00000497984 CCR2P41597 374 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 SNAP25P60880 206 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 TMEM258P61165 79 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 HPCAP84074 193 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 GLO1Q04760 184 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 TMEM155Q4W5P6 130 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 UNQ6190/PRO20217Q6UXQ8 127 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 BAP18Q8IXM2 172 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 ATP6V1C2Q8NEY4 427 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 OR52E4Q8NGH9 312 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 OR1L8Q8NGR8 309 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 CPNE2Q96FN4 548 aaPredicted RBP0.57□□□□□ -2.32
SMC4-227ENST00000497984 MED10Q9BTT4 135 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 MROQ9BYG7 248 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 METTL9Q9H1A3 318 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 OR52A5Q9H2C5 316 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 VCX3BQ9H321 246 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 PARVAQ9NVD7 372 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 EMC3Q9P0I2 261 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 ANGPT4Q9Y264 503 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 HDGFL3Q9Y3E1 203 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 ATAD5Q96QE3 1844 aa0.57□□□□□ -2.32
SMC4-227ENST00000497984 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 A0A087WUU8 490 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 TRAV8-1A0A0A6YYK1 113 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 IGKV3D-7A0A0C4DH55 119 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 IGKV3OR2-268A0A0C4DH90 116 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 TRBV6-5A0A0K0K1A5 114 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 DAPL1A0PJW8 107 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 TXNDC9O14530 226 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 AZIN1O14977 448 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 YKT6O15498 198 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 NDUFS6O75380 124 aaKnown RBP0.56□□□□□ -2.32
SMC4-227ENST00000497984 NPYP01303 97 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 LINC00614P0C842 121 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 GPX2P18283 190 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 F8A1P23610 371 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 MIPP30301 263 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 IFNGR2P38484 337 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 GABRA2P47869 451 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 CLDN12P56749 244 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 PMS2P3Q13401 168 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 USF2Q15853 346 aaPredicted RBP0.56□□□□□ -2.32
SMC4-227ENST00000497984 NNATQ16517 81 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 CLEC12BQ2HXU8 276 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 HLA-DRB5Q30154 266 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 SPERTQ8NA61 448 aa0.56□□□□□ -2.32
SMC4-227ENST00000497984 OR10D3Q8NH80 312 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms