RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CFHR4Q92496 578 aa16.09■□□□□ 0.17
CTSD-206ENST00000497544 AKR1E2Q96JD6 320 aa16.09■□□□□ 0.17
CTSD-206ENST00000497544 PRRT1Q99946 306 aa16.09■□□□□ 0.17
CTSD-206ENST00000497544 PITPNC1Q9UKF7 332 aa16.09■□□□□ 0.17
CTSD-206ENST00000497544 DNAJC9-AS1A6NH13 148 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 CENPXA8MT69 81 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 VENTXO95231 258 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 PGAM2P15259 253 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 GNRHRP30968 328 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 UCP3P55916 312 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 AADACL3Q5VUY0 350 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 GLDNQ6ZMI3 551 aaPredicted RBP16.08■□□□□ 0.16
CTSD-206ENST00000497544 ZDHHC22Q8N966 263 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 PIFOQ8TCI5 191 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 ADTRPQ96IZ2 230 aa16.08■□□□□ 0.16
CTSD-206ENST00000497544 FAM90A9PA6NNJ1 464 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 SNRNP70P08621 437 aaKnown RBP16.07■□□□□ 0.16
CTSD-206ENST00000497544 MC5RP33032 325 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 THBS3P49746 956 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 HABP2Q14520 560 aaPredicted RBP16.07■□□□□ 0.16
CTSD-206ENST00000497544 LHFPL1Q86WI0 220 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 C5orf30Q96GV9 206 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 FXYD6Q9H0Q3 95 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 ESM1Q9NQ30 184 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 TCF19Q9Y242 345 aa16.07■□□□□ 0.16
CTSD-206ENST00000497544 NBEAL2Q6ZNJ1 2754 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 CLDN34H7C241 214 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 GPR31O00270 319 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 IGKV1D-33P01593 117 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 IGKV1-33P01594 117 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 IGLV2-14P01704 120 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 APOA2P02652 100 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 S100GP29377 79 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 DUTP33316 252 aaKnown RBP16.06■□□□□ 0.16
CTSD-206ENST00000497544 ECI1P42126 302 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 ZNF66Q6ZN08 573 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 IDO2Q6ZQW0 420 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 ZNF818PQ6ZRF7 136 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 CMTM1Q8IZ96 169 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 SLC38A6Q8IZM9 456 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 ZNF383Q8NA42 475 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 OR5AN1Q8NGI8 311 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 OR2T10Q8NGZ9 312 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 SGMS2Q8NHU3 365 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 ZFAND1Q8TCF1 268 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 TSC22D3Q99576 134 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 HSD17B10Q99714 261 aaKnown RBP16.06■□□□□ 0.16
CTSD-206ENST00000497544 CHIAQ9BZP6 476 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 VPREB3Q9UKI3 123 aa16.06■□□□□ 0.16
CTSD-206ENST00000497544 NAP1L6A6NFF2 107 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 H7C2Y5 167 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 TRIM77I1YAP6 450 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 LINC00205P59089 165 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 UBA52P62987 128 aaKnown RBP16.05■□□□□ 0.16
CTSD-206ENST00000497544 TAGLNQ01995 201 aaKnown RBP16.05■□□□□ 0.16
CTSD-206ENST00000497544 HNF4GQ14541 408 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 C16orf87Q6PH81 154 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 BVESQ8NE79 360 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 MARCH1Q8TCQ1 289 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 SCGB3A2Q96PL1 93 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 C7orf50Q9BRJ6 194 aaKnown RBP16.05■□□□□ 0.16
CTSD-206ENST00000497544 RSRP1Q9BUV0 290 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 SLC2A8Q9NY64 477 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 PRELID3BQ9Y3B1 194 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 WASHC3Q9Y3C0 194 aa16.05■□□□□ 0.16
CTSD-206ENST00000497544 A6NDX4 124 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 H0YJW9 148 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 TNFSF12O43508 249 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 UPK1BO75841 260 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 MOSP00540 346 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 TMEM11P17152 192 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 DEFA6Q01524 100 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 EBI3Q14213 229 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 TCTEX1D2Q8WW35 142 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 EAF1Q96JC9 268 aaPredicted RBP16.04■□□□□ 0.16
CTSD-206ENST00000497544 SLC35D1Q9NTN3 355 aa16.04■□□□□ 0.16
CTSD-206ENST00000497544 LINC00473A8K010 186 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 PGLYRP1O75594 196 aaPredicted RBP16.03■□□□□ 0.16
CTSD-206ENST00000497544 CRYBA1P05813 215 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 RRASP10301 218 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 CATR1Q13166 79 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 CBX3Q13185 183 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 ABCA11PQ4W5N1 156 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 PHLDA2Q53GA4 152 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 CCBE1Q6UXH8 406 aaPredicted RBP16.03■□□□□ 0.16
CTSD-206ENST00000497544 LIAT1Q6ZQX7 453 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 KCTD9Q7L273 389 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 TMEM219Q86XT9 240 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 OR13C8Q8NGS7 320 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 ZNF486Q96H40 463 aaPredicted RBP16.03■□□□□ 0.16
CTSD-206ENST00000497544 GPHA2Q96T91 129 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 RAB18Q9NP72 206 aa16.03■□□□□ 0.16
CTSD-206ENST00000497544 GPR137BO60478 399 aa16.02■□□□□ 0.16
CTSD-206ENST00000497544 RNASE1P07998 156 aaKnown RBP16.02■□□□□ 0.16
CTSD-206ENST00000497544 RPL30P62888 115 aaKnown RBP16.02■□□□□ 0.16
CTSD-206ENST00000497544 SURF2Q15527 256 aaPredicted RBP16.02■□□□□ 0.16
CTSD-206ENST00000497544 RTL8BQ17RB0 113 aa16.02■□□□□ 0.16
CTSD-206ENST00000497544 C16orf82Q7Z2V1 217 aa16.02■□□□□ 0.16
CTSD-206ENST00000497544 PDPNQ86YL7 162 aa16.02■□□□□ 0.16
CTSD-206ENST00000497544 RBM14Q96PK6 669 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms