RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 LYRM2Q9NU23 88 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 MMP9P14780 707 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 PVALBP20472 110 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 CAV2P51636 162 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 DLX6P56179 175 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 MIDNQ504T8 468 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 AVPI1Q5T686 147 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 ZNF841Q6ZN19 808 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 OR10A7Q8NGE5 316 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 TMED6Q8WW62 240 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 DDB2Q92466 427 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 BBC3Q96PG8 261 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 COA4Q9NYJ1 87 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 LAMP3Q9UQV4 416 aa11.23□□□□□ -0.61
SPTBN1-205ENST00000496323 RAB29O14966 203 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 FCGR3BO75015 233 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 GAPDHP04406 335 aaKnown RBP11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 RRASP10301 218 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 COMMD7Q86VX2 200 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 LYG1Q8N1E2 194 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 TMEM252Q8N6L7 170 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 CD300LFQ8TDQ1 290 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 LPAR3Q9UBY5 353 aa11.22□□□□□ -0.61
SPTBN1-205ENST00000496323 ABCA4P78363 2273 aa11.21□□□□□ -0.61
SPTBN1-205ENST00000496323 VAMP2P63027 116 aa11.21□□□□□ -0.61
SPTBN1-205ENST00000496323 MRPS11P82912 194 aaKnown RBP11.21□□□□□ -0.61
SPTBN1-205ENST00000496323 TMEM155Q4W5P6 130 aa11.21□□□□□ -0.61
SPTBN1-205ENST00000496323 PDZD9Q8IXQ8 264 aa11.21□□□□□ -0.61
SPTBN1-205ENST00000496323 TANC2Q9HCD6 1990 aa11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 WRBO00258 174 aa11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 TOR1AO14656 332 aa11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 JTBO76095 146 aa11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 PRB1P04280 392 aa11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 DAOP14920 347 aa11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 C11orf42Q8N5U0 333 aa11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 RBMXL1Q96E39 390 aaKnown RBP11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 BARX1Q9HBU1 254 aaPredicted RBP11.21□□□□□ -0.62
SPTBN1-205ENST00000496323 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 RBFOX2O43251 390 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 SYNGR2O43760 224 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 ZNF383Q8NA42 475 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 UBAC2Q8NBM4 344 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 NEU4Q8WWR8 484 aaPredicted RBP11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 RAB40CQ96S21 281 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 ARV1Q9H2C2 271 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 PLA2G2EQ9NZK7 142 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 ATG12O94817 140 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 HPRT1P00492 218 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 FAM157CP0CG43 387 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 R3HDM4Q96D70 268 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 S1PR3Q99500 378 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 REG4Q9BYZ8 158 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 MED9Q9NWA0 146 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 HSPB7Q9UBY9 170 aa11.2□□□□□ -0.62
SPTBN1-205ENST00000496323 FAM90A26D6RGX4 464 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 H3BP45 60 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 TXNL1O43396 289 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 CST7O76096 145 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 IAPPP10997 89 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 TNFRSF9Q07011 255 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 H2BFWTQ7Z2G1 175 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 SLC25A31Q9H0C2 315 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 PRELID3BQ9Y3B1 194 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 WSB1Q9Y6I7 421 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 DSCAML1Q8TD84 2053 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 TRBV23-1A0A0A0MS06 115 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 FGF16O43320 207 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 RNF224P0DH78 156 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 CT45A6P0DMU7 189 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 CT45A5P0DMU8 189 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 CT45A7P0DMV0 189 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 UBE2KP61086 200 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 EIF5AP63241 154 aaKnown RBP11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 VKORC1L1Q8N0U8 176 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 UBTD1Q9HAC8 227 aa11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.19□□□□□ -0.62
SPTBN1-205ENST00000496323 MFSD2BA6NFX1 497 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 A6NNC1 897 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 CDKN1AP38936 164 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 KIR2DS2P43631 304 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 THBS3P49746 956 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 CLINT1Q14677 625 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 RBKSQ9H477 322 aa11.18□□□□□ -0.62
SPTBN1-205ENST00000496323 A0A087X0M5 115 aa11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 A0A1B0GX30 115 aa11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 NDUFS7O75251 213 aa11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 FBXO24O75426 580 aa11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 IGHV1-8P0DP01 117 aa11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 DYNLT3P51808 116 aa11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 RPL23AP62750 156 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-205ENST00000496323 BAXQ07812 192 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms