RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	FUT9	Q9Y231	359 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TMEM250	H0YL14	139 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GYPA	P02724	150 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TFF1	P04155	84 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HOXA4	Q00056	320 aa	Predicted RBP	11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	C14orf144	Q96I85	54 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MANBAL	Q9NQG1	85 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	C17orf112	F2Z3M2	114 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SP1	P08047	785 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071		Q3ZCU0	254 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CIB3	Q96Q77	187 aa	Predicted RBP	11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IER2	Q9BTL4	223 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MBNL3	Q9NUK0	354 aa	Known RBP	11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GTF3C1	Q12789	2109 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	C11orf94	C9JXX5	98 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SMPD2	O60906	423 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HRAS	P01112	189 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CRYAA	P02489	173 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ACP1	P24666	158 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	OR2T10	Q8NGZ9	312 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	FAM234A	Q9H0X4	552 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	WASF3	Q9UPY6	502 aa		11.29	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071		A0A1W2PPV4	95 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PFN1	P07737	140 aa	Known RBP	11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CD46	P15529	392 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CDC34	P49427	236 aa	Predicted RBP	11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZNF146	Q15072	292 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	P2RY6	Q15077	328 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZBTB34	Q8NCN2	500 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	OR51G1	Q8NGK1	321 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	NPCDR1	Q9BY65	106 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PSG11	Q9UQ72	335 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	WIPI2	Q9Y4P8	454 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MED13	Q9UHV7	2174 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	WNT2	P09544	360 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	EGR1	P18146	543 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HOXC12	P31275	282 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	LINC00205	P59089	165 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	EDDM3A	Q14507	147 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	KCNIP4	Q6PIL6	250 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MRPL41	Q8IXM3	137 aa	Known RBP	11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	AGMAT	Q9BSE5	352 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TRGV5	A0A0B4J1U4	118 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	OOEP	A6NGQ2	149 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	AMBP	P02760	352 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	EDDM3B	P56851	147 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ERVK11-1	P61568	191 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	FZR1	Q9UM11	496 aa		11.28	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GZMH	P20718	246 aa		11.27	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IL17B	Q9UHF5	180 aa		11.27	□□□□□ -0.6
SUPT20H-222	ENST00000495071		A0A0U1RQK1	487 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071		A0A1B0GV90	55 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ST8SIA5	O15466	376 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SSTR5	P35346	364 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	FAM3B	P58499	235 aa	Predicted RBP	11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PSG7	Q13046	419 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ALKBH2	Q6NS38	261 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CNEP1R1	Q8N9A8	125 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ANAPC16	Q96DE5	110 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	C1QTNF9B	B2RNN3	333 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PMS2P11	Q13670	270 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	FAM78B	Q5VT40	261 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TAAR6	Q96RI8	345 aa		11.27	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TIMM8A	O60220	97 aa	Predicted RBP	11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	CLDN14	O95500	239 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PRAMEF6	Q5VXH4	476 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	REC114	Q7Z4M0	266 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	C1orf210	Q8IVY1	113 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	DDA1	Q9BW61	102 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TRAV38-1	A0A0B4J264	116 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	MPL	P40238	635 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TGIF2LY	Q8IUE0	185 aa		11.26	□□□□□ -0.61
SUPT20H-222	ENST00000495071	MPV17	P39210	176 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	FABP6	P51161	128 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	JOSD1	Q15040	202 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	UNQ6494/PRO21346	Q6UXR6	183 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GP6	Q9HCN6	339 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GNG12	Q9UBI6	72 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ZNF320	A2RRD8	509 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	DVL1	O14640	695 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	GCSAML	Q5JQS6	135 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TMPRSS7	Q7RTY8	843 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	KLF14	Q8TD94	323 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	TMEM18	Q96B42	140 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	ARRDC1-AS1	Q9H2J1	176 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PATZ1	Q9HBE1	687 aa	Known RBP	11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	HEYL	Q9NQ87	328 aa	Predicted RBP	11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PRRC2C	Q9Y520	2896 aa	Known RBP	11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	MARCH11	A6NNE9	402 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	RAB29	O14966	203 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	PRAMEF5	Q5TYX0	476 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	COL6A3	P12111	3177 aa		11.25	□□□□□ -0.61
SUPT20H-222	ENST00000495071	C21orf140	B9A014	251 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	SPINT2	O43291	252 aa		11.24	□□□□□ -0.61
SUPT20H-222	ENST00000495071	FCGR3B	O75015	233 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms