RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 LHX2P50458 406 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 ZNF616Q08AN1 781 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 CST6Q15828 149 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 GRK1Q15835 563 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 TMEM241Q24JQ0 296 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 LRP11Q86VZ4 500 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 OR4K15Q8NH41 348 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 LYZL4Q96KX0 146 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 C12orf57Q99622 126 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 CHAC1Q9BUX1 264 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 CA10Q9NS85 328 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 BICRAQ9NZM4 1560 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 HECW2Q9P2P5 1572 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 CCNB3Q8WWL7 1395 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 ABCC12Q96J65 1359 aa4.9□□□□□ -1.63
SNX13-210ENST00000494402 WDR81Q562E7 1941 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 UHRF1BP1Q6BDS2 1440 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 SSH2Q76I76 1423 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 ZNF518AQ6AHZ1 1483 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 ITGB4P16144 1822 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 IGLV1-50A0A075B6I6 118 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 TRAV36DV7A0A075B6V5 113 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 IGHV1-45A0A0A0MS14 117 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 RGS5O15539 181 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 POP7O75817 140 aaKnown RBP4.89□□□□□ -1.63
SNX13-210ENST00000494402 IGLV3-27P01718 113 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 HSPB1P04792 205 aaKnown RBP4.89□□□□□ -1.63
SNX13-210ENST00000494402 HTR1AP08908 422 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 MPC1LP0DKB6 136 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 BLVRBP30043 206 aaPredicted RBP4.89□□□□□ -1.63
SNX13-210ENST00000494402 PPP1CCP36873 323 aaKnown RBP4.89□□□□□ -1.63
SNX13-210ENST00000494402 CXCL5P42830 114 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 NMUP48645 174 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 LINC00313P59037 77 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 HTR4Q13639 388 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 LTC4SQ16873 150 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 KLHDC8BQ8IXV7 354 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 ZDHHC22Q8N966 263 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 CANT1Q8WVQ1 401 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 TMEM203Q969S6 136 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 GNPNAT1Q96EK6 184 aaPredicted RBP4.89□□□□□ -1.63
SNX13-210ENST00000494402 ZNF382Q96SR6 550 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 CCL13Q99616 98 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 TAAR3PQ9P1P4 343 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 LAMTOR3Q9UHA4 124 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 AK3Q9UIJ7 227 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 COQ4Q9Y3A0 265 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 NAV1Q8NEY1 1877 aa4.89□□□□□ -1.63
SNX13-210ENST00000494402 DENND4BO75064 1496 aaPredicted RBP4.88□□□□□ -1.63
SNX13-210ENST00000494402 TRBV19A0A075B6N1 114 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 IGHV3-66A0A0C4DH42 116 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 CCDC160A6NGH7 325 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 FSTL3O95633 263 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 LTAP01374 205 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 OPN1SWP03999 348 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 UBBP0CG47 229 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 CNTFRP26992 372 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 UBE2AP49459 152 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 HES3Q5TGS1 186 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 AWAT2Q6E213 333 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 ZNF613Q6PF04 617 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 BAP18Q8IXM2 172 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 TMEM86AQ8N2M4 240 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 ZNF664Q8N3J9 261 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 SLC22A24Q8N4F4 322 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 C12orf45Q8N5I9 185 aaPredicted RBP4.88□□□□□ -1.63
SNX13-210ENST00000494402 C20orf203Q8NBC4 194 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 NUP35Q8NFH5 326 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 OR13C8Q8NGS7 320 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 RTN4IP1Q8WWV3 396 aaPredicted RBP4.88□□□□□ -1.63
SNX13-210ENST00000494402 OR2M2Q96R28 347 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 OR2A5Q96R48 311 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 OPRPNQ99935 248 aaPredicted RBP4.88□□□□□ -1.63
SNX13-210ENST00000494402 C20orf27Q9GZN8 174 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 FGF23Q9GZV9 251 aaPredicted RBP4.88□□□□□ -1.63
SNX13-210ENST00000494402 SND1-IT1Q9HBX3 110 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 GPR84Q9NQS5 396 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 RTL9Q8NET4 1388 aa4.88□□□□□ -1.63
SNX13-210ENST00000494402 TRAV4A0A0B4J268 109 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 OR7C2O60412 319 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 SCO1O75880 301 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 MAS1P04201 325 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 RPL7P18124 248 aaKnown RBP4.87□□□□□ -1.63
SNX13-210ENST00000494402 ATP5G3P48201 142 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 NANOS2P60321 138 aaKnown RBP4.87□□□□□ -1.63
SNX13-210ENST00000494402 ATP5G2Q06055 141 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 LOXL1Q08397 574 aaPredicted RBP4.87□□□□□ -1.63
SNX13-210ENST00000494402 GLT8D1Q68CQ7 371 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 MKXQ8IYA7 352 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 EXOC3-AS1Q8N2X6 119 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 ZNF525Q8N782 197 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 OR8A1Q8NGG7 326 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 OR13C4Q8NGS5 318 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 SLC25A40Q8TBP6 338 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 C15orf40Q8WUR7 153 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 PHYHIPLQ96FC7 376 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 SOSTQ9BQB4 213 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 TCEAL7Q9BRU2 100 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 PDFQ9HBH1 243 aa4.87□□□□□ -1.63
SNX13-210ENST00000494402 TVP23BQ9NYZ1 205 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms