RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SOX6P35712 828 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 GPR12P47775 334 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 HSPA13P48723 471 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 CLDN12P56749 244 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 FABP5Q01469 135 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 P2RY14Q15391 338 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 HMGN3Q15651 99 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 PNLIPRP3Q17RR3 467 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 C2orf76Q3KRA6 126 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 ACSM6Q6P461 480 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 TEX38Q6PEX7 206 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 ODF3L1Q8IXM7 274 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 OR51D1Q8NGF3 324 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 OR8H1Q8NGG4 311 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 SETD6Q8TBK2 473 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 GFI1Q99684 422 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 URM1Q9BTM9 101 aaKnown RBP6.34□□□□□ -1.39
RIF1-211ENST00000494333 ABHD14AQ9BUJ0 271 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 GON7Q9BXV9 100 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 LPAR5Q9H1C0 372 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 ZFP57Q9NU63 452 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 NECAP2Q9NVZ3 263 aa6.34□□□□□ -1.39
RIF1-211ENST00000494333 VWFP04275 2813 aa6.34□□□□□ -1.4
RIF1-211ENST00000494333 NOTCH1P46531 2555 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 CGB1A6NKQ9 187 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 NAPSAO96009 420 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 SLC2A2P11168 524 aaPredicted RBP6.33□□□□□ -1.4
RIF1-211ENST00000494333 OR3A3P47888 321 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 VEGFCP49767 419 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 PSMD7P51665 324 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 TMEM50BP56557 158 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 ACTBP60709 375 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 RPL23AP62750 156 aaKnown RBP6.33□□□□□ -1.4
RIF1-211ENST00000494333 MMDQ15546 238 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 RAB11BQ15907 218 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 LY6G6FQ5SQ64 297 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 ZNF880Q6PDB4 577 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 C18orf65Q6ZTR6 163 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 OR2W3Q7Z3T1 314 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 FAM89BQ8N5H3 189 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 FAM71E2Q8N5Q1 922 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 COMMD1Q8N668 190 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 OR2AK2Q8NG84 335 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 MRAPQ8TCY5 172 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 FAM3DQ96BQ1 224 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 HSPB9Q9BQS6 159 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 HDHD3Q9BSH5 251 aaPredicted RBP6.33□□□□□ -1.4
RIF1-211ENST00000494333 RIMS4Q9H426 269 aaPredicted RBP6.33□□□□□ -1.4
RIF1-211ENST00000494333 ACOT13Q9NPJ3 140 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 AK3Q9UIJ7 227 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 BLOC1S6Q9UL45 172 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 V9GY05 133 aa6.33□□□□□ -1.4
RIF1-211ENST00000494333 SAA2-SAA4A0A096LPE2 208 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 DENRO43583 198 aaKnown RBP6.32□□□□□ -1.4
RIF1-211ENST00000494333 DUS4LO95620 317 aaKnown RBP6.32□□□□□ -1.4
RIF1-211ENST00000494333 SAA2P0DJI9 122 aaPredicted RBP6.32□□□□□ -1.4
RIF1-211ENST00000494333 VDAC1P21796 283 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 CNTFRP26992 372 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 CEACAM6P40199 344 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 MYCNOSP40205 109 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 THBS3P49746 956 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 TBCEQ15813 527 aaPredicted RBP6.32□□□□□ -1.4
RIF1-211ENST00000494333 CXorf66Q5JRM2 361 aaPredicted RBP6.32□□□□□ -1.4
RIF1-211ENST00000494333 HES5Q5TA89 166 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 ZNF833PQ6ZTB9 187 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 ZNF695Q8IW36 515 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 KLHL30-AS1Q8NEE0 82 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 ARHGAP5-AS1Q96IT6 56 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 NABP2Q9BQ15 211 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 ZNF251Q9BRH9 671 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 PECRQ9BY49 303 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 MRPL20Q9BYC9 149 aaKnown RBP6.32□□□□□ -1.4
RIF1-211ENST00000494333 IFI27L2Q9H2X8 130 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 PIPOXQ9P0Z9 390 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 ZNF107Q9UII5 783 aaPredicted RBP6.32□□□□□ -1.4
RIF1-211ENST00000494333 HSF4Q9ULV5 492 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 RAB26Q9ULW5 256 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 PLXNB1O43157 2135 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 NOTCH3Q9UM47 2321 aa6.32□□□□□ -1.4
RIF1-211ENST00000494333 TRBV6-6A0A0A6YYG2 114 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 FOXI3A8MTJ6 420 aaPredicted RBP6.31□□□□□ -1.4
RIF1-211ENST00000494333 PDCD5O14737 125 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 RAB29O14966 203 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 NBR2O15453 112 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 HSPA12AO43301 675 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 IGF1P05019 195 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 SCTP09683 121 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 ZBTB25P24278 435 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 SLC6A1P30531 599 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 RANBP1P43487 201 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 OR10A3P58181 314 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 PLA2G7Q13093 441 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 SSX1Q16384 188 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 RPL39P5Q59GN2 51 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 LIN54Q6MZP7 749 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 MOB1BQ7L9L4 216 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 ZNF367Q7RTV3 350 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 OR56B1Q8NGI3 324 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 GLMPQ8WWB7 406 aa6.31□□□□□ -1.4
RIF1-211ENST00000494333 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms