RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SMIM4Q8WVI0 70 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 RASL11BQ9BPW5 248 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 ZNF2Q9BSG1 426 aaPredicted RBP9.93□□□□□ -0.82
TRA2A-209ENST00000494255 SLC35D1Q9NTN3 355 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 RBMX2Q9Y388 322 aaKnown RBP9.93□□□□□ -0.82
TRA2A-209ENST00000494255 COL6A5A8TX70 2615 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 AMY1AP04745 511 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 AMY2AP04746 511 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 IFNA6P05013 189 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 RRASP10301 218 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 TBPP20226 339 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 VDAC2P45880 294 aaPredicted RBP9.93□□□□□ -0.82
TRA2A-209ENST00000494255 MSMO1Q15800 293 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 RTL8BQ17RB0 113 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 RNASE10Q5GAN6 216 aaKnown RBP9.93□□□□□ -0.82
TRA2A-209ENST00000494255 DHRS11Q6UWP2 260 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 TMEM17Q86X19 198 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 BORCS5Q969J3 196 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 C5orf30Q96GV9 206 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 RNF5Q99942 180 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 KIAA1456Q9P272 454 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 PRELID3BQ9Y3B1 194 aa9.93□□□□□ -0.82
TRA2A-209ENST00000494255 SH2D7A6NKC9 451 aaPredicted RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 M0QYG6 137 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 NBR2O15453 112 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 DUTP33316 252 aaKnown RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 F2RL1P55085 397 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 LINC00205P59089 165 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 TAS2R19P59542 299 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 RPS16P62249 146 aaKnown RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 SPANXN2Q5MJ10 180 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 Q6ZS46 218 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 KCTD9Q7L273 389 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 Q8N9W7 124 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 TMEM229BQ8NBD8 167 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 ZBTB34Q8NCN2 500 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 WFDC12Q8WWY7 111 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 MOB3AQ96BX8 217 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 FLYWCH2Q96CP2 140 aaKnown RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 RBMXL1Q96E39 390 aaKnown RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 HSD17B10Q99714 261 aaKnown RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 ZNF747Q9BV97 191 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 PLSCR3Q9NRY6 295 aa9.92□□□□□ -0.82
TRA2A-209ENST00000494255 LIN7CQ9NUP9 197 aaKnown RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 ZNF107Q9UII5 783 aaPredicted RBP9.92□□□□□ -0.82
TRA2A-209ENST00000494255 GSTZ1O43708 216 aaPredicted RBP9.91□□□□□ -0.82
TRA2A-209ENST00000494255 CD3DP04234 171 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 CSF1P09603 554 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 VSIG10L2P0DP72 767 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 PROK1P58294 105 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 PYDC2Q56P42 97 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 VAX1Q5SQQ9 334 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 ZNF660Q6AZW8 331 aaPredicted RBP9.91□□□□□ -0.82
TRA2A-209ENST00000494255 TSNAXQ99598 290 aaKnown RBP9.91□□□□□ -0.82
TRA2A-209ENST00000494255 SOSTQ9BQB4 213 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 CCL28Q9NRJ3 127 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 TAS2R8Q9NYW2 309 aa9.91□□□□□ -0.82
TRA2A-209ENST00000494255 LINC00473A8K010 186 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 RAB3DO95716 219 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 CNTFRP26992 372 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 PLGLAQ15195 96 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 SHISA2Q6UWI4 295 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 ZNF66Q6ZN08 573 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 CCDC190Q86UF4 302 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 FAM71E2Q8N5Q1 922 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 KLHDC1Q8N7A1 406 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 BVESQ8NE79 360 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 NPBQ8NG41 125 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 OR6Q1Q8NGQ2 317 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 TCTEX1D2Q8WW35 142 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 RITA1Q96K30 269 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 SERTAD4Q9NUC0 356 aa9.9□□□□□ -0.82
TRA2A-209ENST00000494255 A6NHS1 94 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 RRHO14718 337 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 NDUFA3O95167 84 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 IGLV2-14P01704 120 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 IGKV1-16P04430 117 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 PTBP1P26599 531 aaKnown RBP eCLIP9.9□□□□□ -0.835e-18■■□□□ 14.2
TRA2A-209ENST00000494255 LGALS7P47929 136 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 CATR1Q13166 79 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 MEF2DQ14814 521 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 TMEM95Q3KNT9 176 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 STEAP1BQ6NZ63 245 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 LPCAT3Q6P1A2 487 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 SLC35E3Q7Z769 313 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 ARRDC1Q8N5I2 433 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 DDB2Q92466 427 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 HARBI1Q96MB7 349 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 TINAGL1Q9GZM7 467 aaPredicted RBP9.9□□□□□ -0.83
TRA2A-209ENST00000494255 BATF3Q9NR55 127 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 V9GYH0 126 aa9.9□□□□□ -0.83
TRA2A-209ENST00000494255 SHOXO15266 292 aa9.89□□□□□ -0.83
TRA2A-209ENST00000494255 KCNAB3O43448 404 aa9.89□□□□□ -0.83
TRA2A-209ENST00000494255 TNFSF12O43508 249 aa9.89□□□□□ -0.83
TRA2A-209ENST00000494255 SPDEFO95238 335 aa9.89□□□□□ -0.83
TRA2A-209ENST00000494255 CRYZL1O95825 349 aa9.89□□□□□ -0.83
TRA2A-209ENST00000494255 CD74P04233 296 aa9.89□□□□□ -0.83
TRA2A-209ENST00000494255 S100GP29377 79 aa9.89□□□□□ -0.83
TRA2A-209ENST00000494255 KIR2DS2P43631 304 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms