RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ZNF660Q6AZW8 331 aaPredicted RBP6.62□□□□□ -1.35
LRCH3-219ENST00000494069 TMEM65Q6PI78 240 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 OR5M8Q8NGP6 311 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 OR10R2Q8NGX6 335 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 ABHD5Q8WTS1 349 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 UBE2E2Q96LR5 201 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 PRR25Q96S07 402 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 GPR61Q9BZJ8 451 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 METTL1Q9UBP6 276 aaKnown RBP6.62□□□□□ -1.35
LRCH3-219ENST00000494069 ZNF221Q9UK13 617 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 BLOC1S6Q9UL45 172 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 MGAT4AQ9UM21 535 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 VSIG4Q9Y279 399 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 NUBP2Q9Y5Y2 271 aa6.62□□□□□ -1.35
LRCH3-219ENST00000494069 J3QRK9 145 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 ARPC1BO15143 372 aaKnown RBP6.61□□□□□ -1.35
LRCH3-219ENST00000494069 SLC25A17O43808 307 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 CA2P00918 260 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 IGHV3-11P01762 117 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 TFAP2AP05549 437 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 CLEC2LP0C7M8 214 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 RAB6AP20340 208 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 PSMB9P28065 219 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 ECI1P42126 302 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 CRIP2P52943 208 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-219ENST00000494069 SLURP1P55000 103 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 GABARAPL2P60520 117 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 RPS16P62249 146 aaKnown RBP6.61□□□□□ -1.35
LRCH3-219ENST00000494069 SSBP2P81877 361 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-219ENST00000494069 PJVKQ0ZLH3 352 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 ZNF260Q3ZCT1 412 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 UBE2UQ5VVX9 321 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 PPP1R27Q86WC6 154 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 LFNGQ8NES3 379 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 OR4A4PQ8NGN8 299 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 DCUN1D4Q92564 292 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 MS4A10Q96PG2 267 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 CHCHD6Q9BRQ6 235 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 CABLES2Q9BTV7 478 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 TOLLIPQ9H0E2 274 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 ATG5Q9H1Y0 275 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 OR2D2Q9H210 308 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 OR51E2Q9H255 320 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 RNF167Q9H6Y7 350 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 SLC35D1Q9NTN3 355 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 TXNL4BQ9NX01 149 aaKnown RBP6.61□□□□□ -1.35
LRCH3-219ENST00000494069 SDHAF2Q9NX18 166 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 FOXA2Q9Y261 457 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-219ENST00000494069 RYR3Q15413 4870 aa6.61□□□□□ -1.35
LRCH3-219ENST00000494069 TRBV6-7A0A0A0MS04 114 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 SRRM4A7MD48 611 aaKnown RBP6.6□□□□□ -1.35
LRCH3-219ENST00000494069 RBBP9O75884 186 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 IGLV2-23P01705 113 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 CRYGBP07316 175 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 MRPS15P82914 257 aaKnown RBP6.6□□□□□ -1.35
LRCH3-219ENST00000494069 RUNX1Q01196 453 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 DEFA5Q01523 94 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 ZNF616Q08AN1 781 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 ARFRP1Q13795 201 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 FXYD3Q14802 87 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 MRGPRG-AS1Q2M3A8 158 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 ACTBL2Q562R1 376 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 C9orf66Q5T8R8 295 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 UNQ5815/PRO19632Q6UWF5 114 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 PDPNQ86YL7 162 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 OR10J5Q8NHC4 309 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 GRPEL2Q8TAA5 225 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 DLX4Q92988 240 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-219ENST00000494069 FLYWCH2Q96CP2 140 aaKnown RBP6.6□□□□□ -1.35
LRCH3-219ENST00000494069 RNF5Q99942 180 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 GHITMQ9H3K2 345 aa6.6□□□□□ -1.35
LRCH3-219ENST00000494069 IGHV4OR15-8A0A075B7B6 117 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 A0A087WW49 117 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 NOTOA8MTQ0 251 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 MRPS14O60783 128 aaKnown RBP6.59□□□□□ -1.35
LRCH3-219ENST00000494069 APOA2P02652 100 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 OR8U8P0C7N1 319 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 GALP22466 123 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 GADD45AP24522 165 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 FGF9P31371 208 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-219ENST00000494069 TALDO1P37837 337 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 SERPINB10P48595 397 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 CD69Q07108 199 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 CDNFQ49AH0 187 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 VAX1Q5SQQ9 334 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 H1FOOQ8IZA3 346 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-219ENST00000494069 BVESQ8NE79 360 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 OR5T1Q8NG75 326 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 NUDCD2Q8WVJ2 157 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 ARPC1AQ92747 370 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 TSNAXQ99598 290 aaKnown RBP6.59□□□□□ -1.35
LRCH3-219ENST00000494069 B9D2Q9BPU9 175 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 ST6GALNAC5Q9BVH7 336 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 DAPK2Q9UIK4 370 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 STUB1Q9UNE7 303 aa6.59□□□□□ -1.35
LRCH3-219ENST00000494069 LSM4Q9Y4Z0 139 aaKnown RBP6.59□□□□□ -1.35
LRCH3-219ENST00000494069 METTL21EPA6NDL7 271 aa6.58□□□□□ -1.36
LRCH3-219ENST00000494069 A6NHS1 94 aa6.58□□□□□ -1.36
LRCH3-219ENST00000494069 LINC00473A8K010 186 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms