RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 ANKRD55Q3KP44 614 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 FAM209BQ5JX69 171 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 C1orf146Q5VVC0 180 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 CEMP1Q6PRD7 247 aaPredicted RBP7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 PDPNQ86YL7 162 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 TMEM217Q8N7C4 229 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 SETD6Q8TBK2 473 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 MRPL30Q8TCC3 161 aaKnown RBP7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 ABHD14BQ96IU4 210 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 AMBNQ9NP70 447 aa7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 TECRQ9NZ01 308 aaKnown RBP7.36□□□□□ -1.23
TNFRSF9-203ENST00000492571 LOC102724200A0A096LPH7 203 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 H3BNX3 289 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 DYNC1I1O14576 645 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 ITGB1BP1O14713 200 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 CEACAM6P40199 344 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 RASSF2P50749 326 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 ATP5G2Q06055 141 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 MED21Q13503 144 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 DYRK1AQ13627 763 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 HMGN3Q15651 99 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 ZIK1Q3SY52 487 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 Q499Y3 187 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 DRAXINQ8NBI3 349 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 OR52I1Q8NGK6 324 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 SMIM19Q96E16 107 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 SULT4A1Q9BR01 284 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 GGTLC1Q9BX51 225 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 RIMS4Q9H426 269 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 BABAM2Q9NXR7 383 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 ADAM30Q9UKF2 790 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 MGAT4AQ9UM21 535 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 ALMS1Q8TCU4 4167 aa7.35□□□□□ -1.23
TNFRSF9-203ENST00000492571 IRGMA1A4Y4 181 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 ZNF785A8K8V0 405 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 IGKV1-16P04430 117 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 MED14OSP0DP75 135 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 IGFBP3P17936 291 aaPredicted RBP7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 MYL12AP19105 171 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 BMI1P35226 326 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 KIR2DS2P43631 304 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 MECP2P51608 486 aaKnown RBP7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 ALDH3A2P51648 485 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 DEFB114Q30KQ6 69 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 YIF1BQ5BJH7 314 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 GLT8D1Q68CQ7 371 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 MOB1BQ7L9L4 216 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 NKAIN3Q8N8D7 197 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 OR52B4Q8NGK2 314 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 FAM46BQ96A09 425 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 ORAI1Q96D31 301 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 OR14A2Q96R54 314 aa7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 EXOSC1Q9Y3B2 195 aaKnown RBP7.34□□□□□ -1.23
TNFRSF9-203ENST00000492571 A0A0J9YWU9 116 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 A0A1W2PPK0 400 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 MSGN1A6NI15 193 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 FAM223BA6NKX1 122 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 ACTL6BO94805 426 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 TRBV12-3P01733 135 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 ALPLP05186 524 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 OR9G9P0C7N8 305 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 UBBP0CG47 229 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 FOLR2P14207 255 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 DCKP27707 260 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 APOC4P55056 127 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 TAGLNQ01995 201 aaKnown RBP7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 SIGIRRQ6IA17 410 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 C5orf24Q7Z6I8 188 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 FAM223AQ8IWN6 122 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 RPP25LQ8N5L8 163 aaKnown RBP7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 RHOXF1Q8NHV9 184 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 SLC7A6OSQ96CW6 309 aaPredicted RBP7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 OVOL2Q9BRP0 275 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 UQCC2Q9BRT2 126 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 AGMATQ9BSE5 352 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 FAAP24Q9BTP7 215 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 PARP12Q9H0J9 701 aaKnown RBP7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 C11orf54Q9H0W9 315 aaPredicted RBP7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 SLC35D1Q9NTN3 355 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 MRPS18AQ9NVS2 196 aaKnown RBP7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 PLEKHJ1Q9NW61 149 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 AASSQ9UDR5 926 aa7.33□□□□□ -1.24
TNFRSF9-203ENST00000492571 TRBV5-5A0A0J9YX44 114 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 M0R1X1 148 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 EI24O14681 340 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 SHOXO15266 292 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 OGG1O15527 345 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 CREBL2O60519 120 aaPredicted RBP7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 GGCTO75223 188 aaKnown RBP7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 CIB2O75838 187 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 LIMS3P0CW19 117 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 LIMS4P0CW20 117 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 RHOGP84095 191 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 TNFRSF9Q07011 255 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 PJVKQ0ZLH3 352 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 EXOSC2Q13868 293 aaKnown RBP7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 FAM106AQ4KMX7 169 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 ZNF57Q68EA5 555 aaPredicted RBP7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 LGALS9CQ6DKI2 356 aa7.32□□□□□ -1.24
TNFRSF9-203ENST00000492571 XAF1Q6GPH4 301 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms