RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.488e-10■■■□□ 14.8
COPS7B-222ENST00000492423 TRAV20A0A0B4J274 112 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 CCSO14618 274 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 GOSR2O14653 212 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 B3GALNT1O75752 331 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 IGKV1-39P01597 117 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 IGKV1D-39P04432 117 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 IGHV4-31P0DP07 118 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 HLA-GP17693 338 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 THBS3P49746 956 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 PRRX1P54821 245 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 DCAF12L2Q5VW00 463 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 SELENOHQ8IZQ5 122 aaKnown RBP12.08□□□□□ -0.48
COPS7B-222ENST00000492423 LGI3Q8N145 548 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 LINC01356Q8N9X3 169 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 ZNF383Q8NA42 475 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
COPS7B-222ENST00000492423 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 TMEM186Q96B77 213 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 S1PR3Q99500 378 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 PCGF1Q9BSM1 259 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 MRPL20Q9BYC9 149 aaKnown RBP12.08□□□□□ -0.48
COPS7B-222ENST00000492423 TMEM56-RWDD3S4R434 201 aa12.08□□□□□ -0.48
COPS7B-222ENST00000492423 POLQO75417 2590 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 LY6LH3BQJ8 138 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 BUB1B-PAK6H3BSN5 160 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 RAMP3O60896 148 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 ADAP1O75689 374 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 SIX6O95475 246 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 CDS2O95674 445 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 ARG1P05089 322 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 CT45A6P0DMU7 189 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 CT45A5P0DMU8 189 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 CT45A7P0DMV0 189 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 IL3RAP26951 378 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 TMEM249Q2WGJ8 235 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 AKAP14Q86UN6 197 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 TCTEX1D1Q8N7M0 179 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 IL22RA2Q969J5 263 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 WDR89Q96FK6 387 aaPredicted RBP12.07□□□□□ -0.48
COPS7B-222ENST00000492423 NABP2Q9BQ15 211 aa12.07□□□□□ -0.48
COPS7B-222ENST00000492423 FAM212BQ9NTI7 297 aaPredicted RBP12.07□□□□□ -0.48
COPS7B-222ENST00000492423 AMMECR1Q9Y4X0 333 aaPredicted RBP12.07□□□□□ -0.48
COPS7B-222ENST00000492423 CCNKO75909 580 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 HOXB5P09067 269 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 LPAR6P43657 344 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 REG1BP48304 166 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 H2BFSP57053 126 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 SRPXP78539 464 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 CD83Q01151 205 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 ZNF816Q0VGE8 651 aaPredicted RBP12.06□□□□□ -0.48
COPS7B-222ENST00000492423 TMEM268Q5VZI3 342 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 LYZL2Q7Z4W2 148 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 SPAG16Q8N0X2 631 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 RBPMSQ93062 196 aaKnown RBP12.06□□□□□ -0.48
COPS7B-222ENST00000492423 LHX4Q969G2 390 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 ADTRPQ96IZ2 230 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 RANGRFQ9HD47 186 aaPredicted RBP12.06□□□□□ -0.48
COPS7B-222ENST00000492423 RAB18Q9NP72 206 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 HIF1ANQ9NWT6 349 aa12.06□□□□□ -0.48
COPS7B-222ENST00000492423 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 A0A1W2PRD5 423 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 A0A1W2PRF3 423 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 A0A1W2PRM7 423 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 MPTX1A8MV57 137 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 PFDN1O60925 122 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 KIR2DS2P43631 304 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
COPS7B-222ENST00000492423 SRSF4Q08170 494 aaKnown RBP12.05□□□□□ -0.48
COPS7B-222ENST00000492423 TPTE2P1Q5T6R2 138 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 GGNBP1Q5YKI7 109 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 LHFPL4Q7Z7J7 247 aa12.05□□□□□ -0.48
COPS7B-222ENST00000492423 CIARTQ8N365 385 aaPredicted RBP12.05□□□□□ -0.48
COPS7B-222ENST00000492423 RBMXL1Q96E39 390 aaKnown RBP12.05□□□□□ -0.48
COPS7B-222ENST00000492423 FYTTD1Q96QD9 318 aaKnown RBP12.05□□□□□ -0.48
COPS7B-222ENST00000492423 ZNF436Q9C0F3 470 aaPredicted RBP12.05□□□□□ -0.48
COPS7B-222ENST00000492423 APCP25054 2843 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 CENPVL3A0A0U1RRI6 287 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 A0A1W2PPI3 338 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 H0YJW9 148 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.48
COPS7B-222ENST00000492423 FCGR3BO75015 233 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 OR2A4O95047 310 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 S1PR2O95136 353 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 SERPINE2P07093 398 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 RPA2P15927 270 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 GATA3P23771 443 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 HTR1DP28221 377 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 GZMKP49863 264 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 UBE2E1P51965 193 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 TGIF2LXQ8IUE1 241 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 ZNF695Q8IW36 515 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 OR5AN1Q8NGI8 311 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 OR10C1Q96KK4 312 aa12.04□□□□□ -0.48
COPS7B-222ENST00000492423 OR2A7Q96R45 310 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms