RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 FGL1Q08830 312 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 LTC4SQ16873 150 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 RTL8BQ17RB0 113 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 VMO1Q7Z5L0 202 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 C5orf24Q7Z6I8 188 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 PDPNQ86YL7 162 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 TGIF2LXQ8IUE1 241 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 ZNF695Q8IW36 515 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 OR4P4Q8NGL7 312 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 TCTEX1D2Q8WW35 142 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 C18orf12Q96KH6 178 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 TP53RKQ96S44 253 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 NMES1Q9C002 83 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 AUP1Q9Y679 476 aa7.86□□□□□ -1.15
USP54-214ENST00000492357 FBN2P35556 2912 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 ABCA12Q86UK0 2595 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 YLPM1P49750 1951 aaKnown RBP7.85□□□□□ -1.15
USP54-214ENST00000492357 hCG_2014768A0A024R1R8 64 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 A0A1B0GU03 582 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 M0R1X1 148 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 SLC31A2O15432 143 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 CCNKO75909 580 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 HRASP01112 189 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 LGALS7P47929 136 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 GNG10P50151 68 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 LGALS4P56470 323 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 AANATQ16613 207 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 TMEM249Q2WGJ8 235 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 ANKRD55Q3KP44 614 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 TMEM177Q53S58 311 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 GSG1LQ6UXU4 331 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 SPAG16Q8N0X2 631 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 OR52B4Q8NGK2 314 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 OR51H1Q8NH63 302 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 CASTOR1Q8WTX7 329 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 RPEQ96AT9 228 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 MALSU1Q96EH3 234 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 Q96MF0 132 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 TBX15Q96SF7 602 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 NEURL2Q9BR09 285 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 BEX2Q9BXY8 128 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 ZNF436Q9C0F3 470 aaPredicted RBP7.85□□□□□ -1.15
USP54-214ENST00000492357 BEX1Q9HBH7 125 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 MMP26Q9NRE1 261 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 MGAT4CQ9UBM8 478 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 RNF150Q9ULK6 438 aa7.85□□□□□ -1.15
USP54-214ENST00000492357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.84□□□□□ -1.15
USP54-214ENST00000492357 CELSR2Q9HCU4 2923 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 LINC00473A8K010 186 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 FAM90A26D6RGX4 464 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 RNASEK-C17orf49H0YIS7 233 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 SPDEFO95238 335 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 PET100P0DJ07 73 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 NQO2P16083 231 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 ZNF16P17020 682 aaPredicted RBP7.84□□□□□ -1.15
USP54-214ENST00000492357 HOXB4P17483 251 aaPredicted RBP7.84□□□□□ -1.15
USP54-214ENST00000492357 CD1BP29016 333 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 DYNLT3P51808 116 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 FCN2Q15485 313 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 SLC9A3R2Q15599 337 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 AARDQ4LEZ3 155 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 NMSQ5H8A3 153 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 TPTE2P1Q5T6R2 138 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 TMEM268Q5VZI3 342 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 CYB5R2Q6BCY4 276 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 HCP5Q6MZN7 132 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 SELENOHQ8IZQ5 122 aaKnown RBP7.84□□□□□ -1.15
USP54-214ENST00000492357 PNKDQ8N490 385 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 OR4C13Q8NGP0 309 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 VSTM2AQ8TAG5 236 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 RRNAD1Q96FB5 475 aaKnown RBP7.84□□□□□ -1.15
USP54-214ENST00000492357 C5orf30Q96GV9 206 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 C2orf50Q96LR7 162 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 NABP2Q9BQ15 211 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 HIF1ANQ9NWT6 349 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 WASHC3Q9Y3C0 194 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 MMP24Q9Y5R2 645 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 PRRC2AP48634 2157 aaKnown RBP7.84□□□□□ -1.15
USP54-214ENST00000492357 TACC2O95359 2948 aa7.84□□□□□ -1.15
USP54-214ENST00000492357 CRYBG3Q68DQ2 2970 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 MEX3AA1L020 520 aaKnown RBP7.83□□□□□ -1.16
USP54-214ENST00000492357 ARG1P05089 322 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 CT45A6P0DMU7 189 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 CT45A5P0DMU8 189 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 CT45A7P0DMV0 189 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 BRS3P32247 399 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 LPAR6P43657 344 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 ERVK-16P61578 105 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 RPL30P62888 115 aaKnown RBP7.83□□□□□ -1.16
USP54-214ENST00000492357 ZNF585BQ52M93 769 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 RPL39P5Q59GN2 51 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 GPR157Q5UAW9 335 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 THOC7Q6I9Y2 204 aaKnown RBP7.83□□□□□ -1.16
USP54-214ENST00000492357 THNSL2Q86YJ6 484 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 FOXRED2Q8IWF2 684 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 SLC35G3Q8N808 338 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 OR11H7Q8NGC8 314 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 OR8H1Q8NGG4 311 aa7.83□□□□□ -1.16
USP54-214ENST00000492357 OR4A5Q8NH83 315 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms