RNA–Protein interactions for RNA: ENST00000491952.1

TTC3-222, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-222ENST00000491952 SLC13A5Q86YT5 568 aaPredicted RBP-0.11□□□□□ -2.43
TTC3-222ENST00000491952 ZNF321PQ8N8H1 164 aa-0.11□□□□□ -2.43
TTC3-222ENST00000491952 HINT2Q9BX68 163 aa-0.11□□□□□ -2.43
TTC3-222ENST00000491952 POLR3HQ9Y535 204 aaPredicted RBP-0.11□□□□□ -2.43
TTC3-222ENST00000491952 SNURFQ9Y675 71 aa-0.11□□□□□ -2.43
TTC3-222ENST00000491952 SETD5Q9C0A6 1442 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 GSTTP1A0A1W2PQM5 241 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 MRASO14807 208 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 GSTZ1O43708 216 aaPredicted RBP-0.12□□□□□ -2.43
TTC3-222ENST00000491952 NDUFB2O95178 105 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 ADORA1P30542 326 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 OR10J1P30954 320 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 GABRA2P47869 451 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 PSMD7P51665 324 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 HERVK_113P63121 156 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 STK38Q15208 465 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 USF2Q15853 346 aaPredicted RBP-0.12□□□□□ -2.43
TTC3-222ENST00000491952 C10orf55Q5SWW7 151 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 SPATA31B1PQ5VZV4 182 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 TTC33Q6PID6 262 aaPredicted RBP-0.12□□□□□ -2.43
TTC3-222ENST00000491952 C1orf174Q8IYL3 243 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 OR2D3Q8NGH3 330 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 OR2Y1Q8NGV0 311 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 TNFAIP8L1Q8WVP5 186 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 IFT81Q8WYA0 676 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 OBSCN-AS1Q96MR7 158 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 NMNAT3Q96T66 252 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 GNB1LQ9BYB4 327 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 MS4A12Q9NXJ0 267 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 REREQ9P2R6 1566 aa-0.12□□□□□ -2.43
TTC3-222ENST00000491952 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 BRWD1Q9NSI6 2320 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 SYNE1Q8NF91 8797 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 ZFC3H1O60293 1989 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 A0A1B0GW15 77 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 A0A1B0GX12 115 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 IBA57-AS1B1ANH7 110 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 H3BT86 120 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 LGALS1P09382 135 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 RNASE3P12724 160 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 PTMSP20962 102 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 CALRP27797 417 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 CA7P43166 264 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 REG1BP48304 166 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 EVX1P49640 407 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 ETV1P50549 477 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 TPI1P60174 286 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 C1DQ13901 141 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 HNRNPA1L2Q32P51 320 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 ATP5L2Q7Z4Y8 100 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 Q8N6K4 173 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 ZNF565Q8N9K5 539 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 OR51H1Q8NH63 302 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 ZNF675Q8TD23 568 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 TMA16Q96EY4 203 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 METTL8Q9H825 291 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 RBMX2Q9Y388 322 aaKnown RBP-0.13□□□□□ -2.43
TTC3-222ENST00000491952 TIMM9Q9Y5J7 89 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 SNX10Q9Y5X0 201 aa-0.13□□□□□ -2.43
TTC3-222ENST00000491952 GLI3P10071 1580 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 TRAV7A0A075B6U4 112 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 H7C2G1 150 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 CRXO43186 299 aaPredicted RBP-0.14□□□□□ -2.43
TTC3-222ENST00000491952 PTNP21246 168 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 CA5AP35218 305 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 RPL28P46779 137 aaKnown RBP-0.14□□□□□ -2.43
TTC3-222ENST00000491952 PLPPR5Q32ZL2 321 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 LRRC34Q8IZ02 419 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 CCDC127Q96BQ5 260 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 LRRC39Q96DD0 335 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 SPRR2GQ9BYE4 73 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 MAT2BQ9NZL9 334 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 GMEB1Q9Y692 573 aa-0.14□□□□□ -2.43
TTC3-222ENST00000491952 SCAF11Q99590 1463 aaKnown RBP-0.15□□□□□ -2.43
TTC3-222ENST00000491952 FLT4P35916 1363 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 A0A087WUU8 490 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 TRBV6-7A0A0A0MS04 114 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 TRAV38-1A0A0B4J264 116 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 SNAP29O95721 258 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 PPBPP02775 128 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 KRTAP2-3P0C7H8 128 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 TRGC1P0CF51 173 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 MIAQ16674 131 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 NKAIN1Q4KMZ8 207 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 DCXRQ7Z4W1 244 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 BAP18Q8IXM2 172 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 UMODL1-AS1Q8N2C9 162 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 SLC22A24Q8N4F4 322 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 OR13C8Q8NGS7 320 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 MRPL57Q9BQC6 102 aaKnown RBP-0.15□□□□□ -2.43
TTC3-222ENST00000491952 KRTAP2-4Q9BYR9 128 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 KRTAP2-1Q9BYU5 128 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 PRRG3Q9BZD7 231 aa-0.15□□□□□ -2.43
TTC3-222ENST00000491952 FRAS1Q86XX4 4008 aa-0.16□□□□□ -2.43
TTC3-222ENST00000491952 MEIS3P1A6NDR6 274 aa-0.16□□□□□ -2.44
TTC3-222ENST00000491952 TMEM212A6NML5 194 aa-0.16□□□□□ -2.44
TTC3-222ENST00000491952 TRAPPC2LH3BP13 241 aa-0.16□□□□□ -2.44
TTC3-222ENST00000491952 M0R381 172 aa-0.16□□□□□ -2.44
TTC3-222ENST00000491952 ARL6IP5O75915 188 aa-0.16□□□□□ -2.44
TTC3-222ENST00000491952 UBBP0CG47 229 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms