RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 RGS11O94810 467 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 FCER2P06734 321 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 LGALS1P09382 135 aaKnown RBP6.84□□□□□ -1.31
HDAC3-211ENST00000491581 PTHLHP12272 177 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 ZBTB25P24278 435 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 SLC6A1P30531 599 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 RPS16P62249 146 aaKnown RBP6.84□□□□□ -1.31
HDAC3-211ENST00000491581 ACTBL2Q562R1 376 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 OR2B11Q5JQS5 317 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 LY6G6FQ5SQ64 297 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 IZUMO2Q6UXV1 221 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 ZNF554Q86TJ5 538 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 BVESQ8NE79 360 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 OR2D2Q9H210 308 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 RNF167Q9H6Y7 350 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 C12orf4Q9NQ89 552 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 SDHAF2Q9NX18 166 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 PIPOXQ9P0Z9 390 aa6.84□□□□□ -1.31
HDAC3-211ENST00000491581 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 IZUMO1RA6ND01 250 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 OR5H14A6NHG9 310 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 LINC00473A8K010 186 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 TRDCB7Z8K6 153 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 LINC01619G3V211 115 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 MFNGO00587 321 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 RAMP3O60896 148 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 TRGV3P03979 118 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 CRYGBP07316 175 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 FCGR3AP08637 254 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 OR8U8P0C7N1 319 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 FRMD6-AS1P0C7T7 363 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 GP9P14770 177 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 MYOD1P15172 320 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 CRIP2P52943 208 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-211ENST00000491581 RUNX1Q01196 453 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 MLLT11Q13015 90 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-211ENST00000491581 FXYD3Q14802 87 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 C10orf55Q5SWW7 151 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF660Q6AZW8 331 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-211ENST00000491581 C22orf42Q6IC83 251 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 EDARADDQ8WWZ3 215 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 URM1Q9BTM9 101 aaKnown RBP6.83□□□□□ -1.32
HDAC3-211ENST00000491581 GPR61Q9BZJ8 451 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF355PQ9NSJ1 428 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 SLC35D1Q9NTN3 355 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF580Q9UK33 172 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 HSF4Q9ULV5 492 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 TPRKBQ9Y3C4 175 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 V9GY05 133 aa6.83□□□□□ -1.32
HDAC3-211ENST00000491581 RAB27BO00194 218 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 FABP7O15540 132 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 TFAP2AP05549 437 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 CLEC2LP0C7M8 214 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 OR5H8P0DN80 308 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 DYRK1AQ13627 763 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 FAM71F2Q6NXP2 309 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 ACSM6Q6P461 480 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 PRSS48Q7RTY5 328 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 VKORC1L1Q8N0U8 176 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 Q8N1Y9 231 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 PTX4Q96A99 478 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 RAB3CQ96E17 227 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 RHOVQ96L33 236 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 RSRP1Q9BUV0 290 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 VCXQ9H320 206 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 ACOT13Q9NPJ3 140 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.82□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF221Q9UK13 617 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 S4R3C0 116 aa6.82□□□□□ -1.32
HDAC3-211ENST00000491581 IGKV1D-13A0A0B4J2D9 117 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 IGKV1-13P0DP09 117 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 NFYAP23511 347 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-211ENST00000491581 MC5RP33032 325 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 RPL30P62888 115 aaKnown RBP6.81□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF45Q02386 682 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 ZFAND6Q6FIF0 208 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 CD200R1LQ6Q8B3 271 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 ZNF562Q6V9R5 426 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 IL34Q6ZMJ4 242 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 MOB1BQ7L9L4 216 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 OR10R2Q8NGX6 335 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 NUDCD2Q8WVJ2 157 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 THRSPQ92748 146 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 HARBI1Q96MB7 349 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 RCHY1Q96PM5 261 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 TINAGL1Q9GZM7 467 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-211ENST00000491581 RETNQ9HD89 108 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 LRRC42Q9Y546 428 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 SMAD5-AS1Q9Y6J3 95 aa6.81□□□□□ -1.32
HDAC3-211ENST00000491581 TRBV6-7A0A0A0MS04 114 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 MSGN1A6NI15 193 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 IFITM5A6NNB3 132 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 E7EUB6 86 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 ITGB1BP1O14713 200 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 SSX5O60225 188 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 ARL6IP5O75915 188 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 CNIH1O95406 144 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 CRYZL1O95825 349 aa6.8□□□□□ -1.32
HDAC3-211ENST00000491581 IGLV2-14P01704 120 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms