RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ABCA12Q86UK0 2595 aa18.96■□□□□ 0.63
USF3-203ENST00000491165 USF3Q68DE3 2245 aa18.96■□□□□ 0.63
USF3-203ENST00000491165 RUNX1Q01196 453 aa18.96■□□□□ 0.63
USF3-203ENST00000491165 PRAMEF6Q5VXH4 476 aa18.96■□□□□ 0.63
USF3-203ENST00000491165 C20orf204Q6ZNR8 217 aa18.96■□□□□ 0.63
USF3-203ENST00000491165 OR10J5Q8NHC4 309 aa18.96■□□□□ 0.63
USF3-203ENST00000491165 OR2W1Q9Y3N9 320 aa18.96■□□□□ 0.63
USF3-203ENST00000491165 C17orf100A8MU93 164 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 VSTM5A8MXK1 200 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 PAX9P55771 341 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 HAGHQ16775 308 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 DPPA3Q6W0C5 159 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 STX12Q86Y82 276 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 ZNF573Q86YE8 665 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 ZNF488Q96MN9 340 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 OR2V2Q96R30 315 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 TCEAL7Q9BRU2 100 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 IGHV2-5P01817 119 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 SRP19P09132 144 aaKnown RBP18.95■□□□□ 0.62
USF3-203ENST00000491165 OR2B8PP59922 312 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 HLA-DRB3P79483 266 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 CCL8P80075 99 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 TLE4Q04727 773 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 NANPQ8TBE9 248 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 RDH5Q92781 318 aa18.95■□□□□ 0.62
USF3-203ENST00000491165 TRAV24A0A0B4J272 114 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 OR5B21A6NL26 309 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 H3BQ15 152 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 DFFBO76075 338 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 GRPP07492 148 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 SLC25A6P12236 298 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 RAB2AP61019 212 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 GNG3P63215 75 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 ZNF880Q6PDB4 577 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 DTX2Q86UW9 622 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 TGIF2LYQ8IUE0 185 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 RBMXL1Q96E39 390 aaKnown RBP18.94■□□□□ 0.62
USF3-203ENST00000491165 YPEL4Q96NS1 127 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 RTL8AQ9BWD3 113 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 OR51I2Q9H344 312 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 CBLN4Q9NTU7 201 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 HECTD1Q9ULT8 2610 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 POLQO75417 2590 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 A0A1B0GU03 582 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 RHBDL1O75783 438 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 GOSR1O95249 250 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 SERPINE2P07093 398 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 TAS2R30P59541 319 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 ZNF506Q5JVG8 444 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 SLC16A13Q7RTY0 426 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 C1QL4Q86Z23 238 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 C11orf53Q8IXP5 236 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 H1FOOQ8IZA3 346 aaPredicted RBP18.94■□□□□ 0.62
USF3-203ENST00000491165 FAM58AQ8N1B3 248 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 NRGNQ92686 78 aa18.94■□□□□ 0.62
USF3-203ENST00000491165 SEBOXQ9HB31 216 aaPredicted RBP18.94■□□□□ 0.62
USF3-203ENST00000491165 A0A0G2JRQ6 117 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 SCAF4O95104 1147 aaKnown RBP18.93■□□□□ 0.62
USF3-203ENST00000491165 IFNA17P01571 189 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 HBE1P02100 147 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 HSPB1P04792 205 aaKnown RBP18.93■□□□□ 0.62
USF3-203ENST00000491165 RPL23AP62750 156 aaKnown RBP18.93■□□□□ 0.62
USF3-203ENST00000491165 ICAM4Q14773 271 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 ZNF826PQ6ZT77 177 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 OR51H1Q8NH63 302 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 ITLN1Q8WWA0 313 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 GPR146Q96CH1 333 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 RAB39BQ96DA2 213 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 CABLES2Q9BTV7 478 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 CXXC4Q9H2H0 198 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 HIPK2Q9H2X6 1198 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 DYNLRB1Q9NP97 96 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 UFSP2Q9NUQ7 469 aa18.93■□□□□ 0.62
USF3-203ENST00000491165 DYSFO75923 2080 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 CDIPTO14735 213 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 CEBPGP53567 150 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 SCCPDHQ8NBX0 429 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 MEGF10Q96KG7 1140 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 DEGS1O15121 323 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 PSG2P11465 335 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 HEPN1Q6WQI6 88 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 RAB40CQ96S21 281 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 ZNF251Q9BRH9 671 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 TREM2Q9NZC2 230 aa18.92■□□□□ 0.62
USF3-203ENST00000491165 AP4M1O00189 453 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 TXNL1O43396 289 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 IFNA5P01569 189 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 ADH4P08319 380 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 OR8U8P0C7N1 319 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 CD200P41217 278 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 KRTAP10-9P60411 292 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 UBE2KP61086 200 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 TNFAIP6P98066 277 aaPredicted RBP18.91■□□□□ 0.62
USF3-203ENST00000491165 ZNF787Q6DD87 383 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 CLDND2Q8NHS1 167 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 RNASE11Q8TAA1 199 aaKnown RBP18.91■□□□□ 0.62
USF3-203ENST00000491165 PKIBQ9C010 78 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 WSB1Q9Y6I7 421 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 A0A087WWC5 75 aa18.91■□□□□ 0.62
USF3-203ENST00000491165 LRP5LA4QPB2 252 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms