RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 CD40LGP29965 261 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 CLDN12P56749 244 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 PLA2G7Q13093 441 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 MED22Q15528 200 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 PLAC9Q5JTB6 97 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 ZFAND6Q6FIF0 208 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 PDPNQ86YL7 162 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 ELOVL1Q9BW60 279 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 PECRQ9BY49 303 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 EDA2RQ9HAV5 297 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 ZNF355PQ9NSJ1 428 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 RDH8Q9NYR8 311 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 ADAM30Q9UKF2 790 aa12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 AK6Q9Y3D8 172 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-209ENST00000490889 LCE6AA0A183 80 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 ANKRD34BA5PLL1 514 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 M0R1X1 148 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 CASQ2O14958 399 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 CRYGBP07316 175 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 CD3GP09693 182 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 VEGFCP49767 419 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 IRF3Q14653 427 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 IL34Q6ZMJ4 242 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 ANKRD13BQ86YJ7 626 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 C5orf30Q96GV9 206 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 CMSS1Q9BQ75 279 aaKnown RBP12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 PLGRKTQ9HBL7 147 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 RANGRFQ9HD47 186 aaPredicted RBP12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 SLC35D1Q9NTN3 355 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 ZNF221Q9UK13 617 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 MGAT4AQ9UM21 535 aa12.69□□□□□ -0.38
SRGAP3-209ENST00000490889 A8MZ25 164 aa12.68□□□□□ -0.38
SRGAP3-209ENST00000490889 APOA2P02652 100 aa12.68□□□□□ -0.38
SRGAP3-209ENST00000490889 KLF5Q13887 457 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-209ENST00000490889 MRGPRG-AS1Q2M3A8 158 aa12.68□□□□□ -0.38
SRGAP3-209ENST00000490889 UFD1Q92890 307 aa12.68□□□□□ -0.38
SRGAP3-209ENST00000490889 PALMDQ9NP74 551 aa12.68□□□□□ -0.38
SRGAP3-209ENST00000490889 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-209ENST00000490889 C13orf42A0A1B0GVH6 325 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 TRDCB7Z8K6 153 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 H3BUA1 57 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 RBMXL2O75526 392 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 TRBV12-3P01733 135 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 ZP3P21754 424 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 RAB11BQ15907 218 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 OR9G4Q8NGQ1 327 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 THAP7Q9BT49 309 aaPredicted RBP12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 SDHAF2Q9NX18 166 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 KCNK7Q9Y2U2 307 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 BIRC6Q9NR09 4857 aa12.67□□□□□ -0.38
SRGAP3-209ENST00000490889 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 CNIH1O95406 144 aa12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 C2orf76Q3KRA6 126 aa12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 MOGAT2Q3SYC2 334 aa12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 IGSF11Q5DX21 431 aa12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 TINAGL1Q9GZM7 467 aaPredicted RBP12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 OR2D2Q9H210 308 aa12.66□□□□□ -0.38
SRGAP3-209ENST00000490889 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 TMEM272A0A1B0GTI8 110 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 BET1O15155 118 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 FABP7O15540 132 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 HSMCR30P0CW71 290 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 APELAP0DMC3 54 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 DYRK1AQ13627 763 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 TPBGQ13641 420 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 OR4A4PQ8NGN8 299 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 FAM3DQ96BQ1 224 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 CABLES2Q9BTV7 478 aa12.65□□□□□ -0.38
SRGAP3-209ENST00000490889 HYDINQ4G0P3 5121 aa12.65□□□□□ -0.39
SRGAP3-209ENST00000490889 TNCP24821 2201 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 BRI3O95415 125 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 CSN3P07498 182 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 FCGR3AP08637 254 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 GSTT2P0CG29 244 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 GSTT2BP0CG30 244 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 CALRP27797 417 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 LGALS7P47929 136 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 FABP5Q01469 135 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 HAGHQ16775 308 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 TMEM177Q53S58 311 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 ZNF343Q6P1L6 599 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 BVESQ8NE79 360 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 MAFIPQ8WZ33 124 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 ISOC1Q96CN7 298 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 SCN3BQ9NY72 215 aa12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 PEF1Q9UBV8 284 aaKnown RBP12.64□□□□□ -0.39
SRGAP3-209ENST00000490889 TRBV6-7A0A0A0MS04 114 aa12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 DENRO43583 198 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 ARL6IP5O75915 188 aa12.63□□□□□ -0.39
SRGAP3-209ENST00000490889 SERPINB10P48595 397 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms