RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MEIS3P1A6NDR6 274 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 J3QRK9 145 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 HPGDSO60760 199 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 IGLV2-14P01704 120 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 FCER2P06734 321 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 ZNF182P17025 639 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-207ENST00000490696 ELK1P19419 428 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 DUTP33316 252 aaKnown RBP12.09□□□□□ -0.47
VPS26A-207ENST00000490696 RPL5P46777 297 aaKnown RBP12.09□□□□□ -0.47
VPS26A-207ENST00000490696 THBS3P49746 956 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 LUMP51884 338 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-207ENST00000490696 ARPC4P59998 168 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 SLC35B1P78383 322 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 CFHR3Q02985 330 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 SPCS2Q15005 226 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 LIN54Q6MZP7 749 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 CLVS1Q8IUQ0 354 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-207ENST00000490696 COMMD1Q8N668 190 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 ZNF645Q8N7E2 425 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 DDB2Q92466 427 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 AP3S1Q92572 193 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 FLYWCH2Q96CP2 140 aaKnown RBP12.09□□□□□ -0.47
VPS26A-207ENST00000490696 FBXL15Q9H469 300 aa12.09□□□□□ -0.47
VPS26A-207ENST00000490696 SPDEFO95238 335 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 RPS16P62249 146 aaKnown RBP12.08□□□□□ -0.48
VPS26A-207ENST00000490696 NDPQ00604 133 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 TAGLNQ01995 201 aaKnown RBP12.08□□□□□ -0.48
VPS26A-207ENST00000490696 PSG5Q15238 335 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 MZT2AQ6P582 158 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 OR4F17Q8NGA8 305 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 OR5AP2Q8NGF4 316 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 RAB2BQ8WUD1 216 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 R3HDM4Q96D70 268 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 ADTRPQ96IZ2 230 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 OR4F4Q96R69 305 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 TSNAXQ99598 290 aaKnown RBP12.08□□□□□ -0.48
VPS26A-207ENST00000490696 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 GON7Q9BXV9 100 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 OR51J1Q9H342 316 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 IFT46Q9NQC8 304 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
VPS26A-207ENST00000490696 RBMX2Q9Y388 322 aaKnown RBP12.08□□□□□ -0.48
VPS26A-207ENST00000490696 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 LINC00473A8K010 186 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 FCN1O00602 326 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 ATP6V0E1O15342 81 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 SLC22A5O76082 557 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 OR5H8P0DN80 308 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 NAT1P18440 290 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 AADACP22760 399 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 FCGR2CP31995 323 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 PRSS3P35030 304 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 TMBIM6P55061 237 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 TEX38Q6PEX7 206 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 RNF152Q8N8N0 203 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 BVESQ8NE79 360 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 GPX8Q8TED1 209 aa12.07□□□□□ -0.48
VPS26A-207ENST00000490696 METTL1Q9UBP6 276 aaKnown RBP12.07□□□□□ -0.48
VPS26A-207ENST00000490696 MRPS7Q9Y2R9 242 aaKnown RBP12.07□□□□□ -0.48
VPS26A-207ENST00000490696 IGHG4P01861 327 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 RRASP10301 218 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 VDAC1P21796 283 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 LGALS7P47929 136 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
VPS26A-207ENST00000490696 CX3CL1P78423 397 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 FOXE3Q13461 319 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
VPS26A-207ENST00000490696 CDK10Q15131 360 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 PLGLAQ15195 96 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 RTL8BQ17RB0 113 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 KHDC1LQ5JSQ8 128 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 ZNF660Q6AZW8 331 aaPredicted RBP12.06□□□□□ -0.48
VPS26A-207ENST00000490696 PARP11Q9NR21 331 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 FBXO7Q9Y3I1 522 aa12.06□□□□□ -0.48
VPS26A-207ENST00000490696 SRRM4A7MD48 611 aaKnown RBP12.05□□□□□ -0.48
VPS26A-207ENST00000490696 G3V318 75 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 SLC25A17O43808 307 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 PPYP01298 95 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 CRYGBP07316 175 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 ELANEP08246 267 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
VPS26A-207ENST00000490696 CRIP2P52943 208 aaPredicted RBP12.05□□□□□ -0.48
VPS26A-207ENST00000490696 RPL30P62888 115 aaKnown RBP12.05□□□□□ -0.48
VPS26A-207ENST00000490696 OVCH2Q7RTZ1 564 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 SNX29P2Q8IUI4 249 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 GIMAP1Q8WWP7 306 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 HARBI1Q96MB7 349 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 SCPEP1Q9HB40 452 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 ZFP57Q9NU63 452 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 ADAM30Q9UKF2 790 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 TGP01266 2768 aa12.05□□□□□ -0.48
VPS26A-207ENST00000490696 FAM25AB3EWG3 89 aa12.04□□□□□ -0.48
VPS26A-207ENST00000490696 FAM25CB3EWG5 89 aa12.04□□□□□ -0.48
VPS26A-207ENST00000490696 FAM25GB3EWG6 89 aa12.04□□□□□ -0.48
VPS26A-207ENST00000490696 SHOXO15266 292 aa12.04□□□□□ -0.48
VPS26A-207ENST00000490696 RPLP1P05386 114 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms