RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, human

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIPF3-208	ENST00000490447	SCT	P09683	121 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	UCHL1	P09936	223 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	MRPS15	P82914	257 aa	Known RBP	13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	P2RY14	Q15391	338 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	RNLS	Q5VYX0	342 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	ZNF383	Q8NA42	475 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	UFD1	Q92890	307 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	CMSS1	Q9BQ75	279 aa	Known RBP	13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	TM2D3	Q9BRN9	247 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447		Q9N2K0	584 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	SLC35D1	Q9NTN3	355 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	HSF4	Q9ULV5	492 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	PTGES3L	E9PB15	166 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447		M0R1X1	148 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	CBX3	Q13185	183 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	MOGAT2	Q3SYC2	334 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	OR5T1	Q8NG75	326 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	RDH8	Q9NYR8	311 aa		13.64	□□□□□ -0.23
YIPF3-208	ENST00000490447	LYST	Q99698	3801 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	ANKRD34B	A5PLL1	514 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	SLC17A2	O00624	439 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	RANBP1	P43487	201 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	LGALS7	P47929	136 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	VEGFC	P49767	419 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	RAB11B	Q15907	218 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	LIPK	Q5VXJ0	399 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	ZFAND6	Q6FIF0	208 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	FAM89B	Q8N5H3	189 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	TMEM203	Q969S6	136 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	ARHGAP5-AS1	Q96IT6	56 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	TMEM68	Q96MH6	324 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447	SCN3B	Q9NY72	215 aa		13.63	□□□□□ -0.23
YIPF3-208	ENST00000490447		A8MZ25	164 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	TRDC	B7Z8K6	153 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447		H0Y980	276 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	PROP1	O75360	226 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	ARL6IP5	O75915	188 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	SNRPB	P14678	240 aa	Known RBP	13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	AADAC	P22760	399 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	SERPINB10	P48595	397 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	LINC00205	P59089	165 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447		Q8N1Y9	231 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	OR56B1	Q8NGI3	324 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	OR9G4	Q8NGQ1	327 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	HARBI1	Q96MB7	349 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	PECR	Q9BY49	303 aa		13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	LSM2	Q9Y333	95 aa	Known RBP	13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	AK6	Q9Y3D8	172 aa	Known RBP	13.62	□□□□□ -0.23
YIPF3-208	ENST00000490447	TENM2	Q9NT68	2774 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	HSMCR30	P0CW71	290 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	CD37	P11049	281 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	TMEM50B	P56557	158 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	TATDN3	Q17R31	274 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	GTSCR1	Q86UQ5	136 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	OR4A4P	Q8NGN8	299 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	PHB2	Q99623	299 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	SPATA25	Q9BR10	227 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	OR2D2	Q9H210	308 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	C19orf73	Q9NVV2	129 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	BLOC1S6	Q9UL45	172 aa		13.61	□□□□□ -0.23
YIPF3-208	ENST00000490447	IGKV1-6	A0A0C4DH72	117 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	LCE6A	A0A183	80 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	BET1	O15155	118 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	SYNJ2BP	P57105	145 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	KLF5	Q13887	457 aa	Predicted RBP	13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	TRAM1	Q15629	374 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	COA4	Q9NYJ1	87 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	PEF1	Q9UBV8	284 aa	Known RBP	13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	TPRKB	Q9Y3C4	175 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	CSMD3	Q7Z407	3707 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	STARD9	Q9P2P6	4700 aa		13.6	□□□□□ -0.23
YIPF3-208	ENST00000490447	SHOX	O15266	292 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	FABP7	O15540	132 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	CD3G	P09693	182 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	PSMA1	P25786	263 aa	Known RBP	13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	CLDN12	P56749	244 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	TAGLN	Q01995	201 aa	Known RBP	13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	PJVK	Q0ZLH3	352 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	RTL8B	Q17RB0	113 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	RPEL1	Q2QD12	228 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	LCN12	Q6JVE5	192 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	OR10J5	Q8NHC4	309 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	GFI1	Q99684	422 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	TUBA4B	Q9H853	241 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	SDHAF2	Q9NX18	166 aa		13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	RBM7	Q9Y580	266 aa	Known RBP	13.59	□□□□□ -0.23
YIPF3-208	ENST00000490447	TNFAIP8	O95379	198 aa		13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	IGLV2-23	P01705	113 aa		13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	IFNA6	P05013	189 aa		13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	CALR	P27797	417 aa	Known RBP	13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	RPS25	P62851	125 aa	Known RBP	13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	SSBP2	P81877	361 aa	Predicted RBP	13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	DEFA5	Q01523	94 aa		13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	PLAC9	Q5JTB6	97 aa		13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	FAM3D	Q96BQ1	224 aa		13.58	□□□□□ -0.24
YIPF3-208	ENST00000490447	USMG5	Q96IX5	58 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms