RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CD302Q8IX05 232 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 BAP18Q8IXM2 172 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 C1orf174Q8IYL3 243 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 RPS4Y2Q8TD47 263 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 SLC37A2Q8TED4 501 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 SLC35G5Q96KT7 338 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 C7orf50Q9BRJ6 194 aaKnown RBP1.35□□□□□ -2.19
CD46-216ENST00000490278 SLC22A4Q9H015 551 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 RPL26L1Q9UNX3 145 aaKnown RBP1.35□□□□□ -2.19
CD46-216ENST00000490278 OTOGLQ3ZCN5 2332 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 RAD50Q92878 1312 aa1.35□□□□□ -2.19
CD46-216ENST00000490278 A0A1W2PP64 1363 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 DOCK10Q96BY6 2186 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 TEX50A0A1B0GTY4 177 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 FABP12A6NFH5 140 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 SIGLEC16A6NMB1 481 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 M0R381 172 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 ATP8B1O43520 1251 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 HPGDSO60760 199 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 UCHL1P09936 223 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 HIST1H1CP16403 213 aaKnown RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 CXCL2P19875 107 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 CXCL3P19876 107 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 CD24P25063 80 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 CDK9P50750 372 aaKnown RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 TMEM33P57088 247 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 GNA13Q14344 377 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 UAP1Q16222 522 aaPredicted RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 PABPC1L2AQ5JQF8 200 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 Q6ZTI0 123 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 LHFPL1Q86WI0 220 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 FUNDC1Q8IVP5 155 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 LRRC34Q8IZ02 419 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 DAND5Q8N907 189 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 CLDND2Q8NHS1 167 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 LHFPL5Q8TAF8 219 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 ASB13Q8WXK3 278 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 ZNF625Q96I27 306 aaPredicted RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 ZNF514Q96K75 400 aaPredicted RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 TIPINQ9BVW5 301 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 NSRP1Q9H0G5 558 aaKnown RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 MS4A6AQ9H2W1 248 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 SPANXB1Q9NS25 103 aaPredicted RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 CFAP45Q9UL16 551 aa1.34□□□□□ -2.19
CD46-216ENST00000490278 PCYT1BQ9Y5K3 369 aaPredicted RBP1.34□□□□□ -2.19
CD46-216ENST00000490278 KDM5BQ9UGL1 1544 aa1.34□□□□□ -2.2
CD46-216ENST00000490278 THSD7AQ9UPZ6 1657 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 TINCRA0A1B0GVN0 87 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 A0A1W2PQD3 144 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 MT-CO2P00403 227 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 SKP1P63208 163 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 ERHP84090 104 aaKnown RBP1.33□□□□□ -2.2
CD46-216ENST00000490278 GNA12Q03113 381 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 FAM19A5Q7Z5A7 132 aaPredicted RBP1.33□□□□□ -2.2
CD46-216ENST00000490278 OR5J2Q8NH18 312 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 PACRGQ96M98 296 aaPredicted RBP1.33□□□□□ -2.2
CD46-216ENST00000490278 TIMM21Q9BVV7 248 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 SLX4Q8IY92 1834 aa1.33□□□□□ -2.2
CD46-216ENST00000490278 DENND4BO75064 1496 aaPredicted RBP1.32□□□□□ -2.2
CD46-216ENST00000490278 TRGV5A0A0B4J1U4 118 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 TRAV41A0A0B4J266 112 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 C5orf49A4QMS7 147 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 IL6P05231 212 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 GPX1P07203 203 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 IFNGR2P38484 337 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 RPL27AP46776 148 aaKnown RBP1.32□□□□□ -2.2
CD46-216ENST00000490278 RPL14P50914 215 aaKnown RBP1.32□□□□□ -2.2
CD46-216ENST00000490278 RAP1GDS1P52306 607 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 RBM11P57052 281 aaKnown RBP1.32□□□□□ -2.2
CD46-216ENST00000490278 UBE2G2P60604 165 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 HLA-DRB3P79483 266 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 HOXC5Q00444 222 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 LGALS9BQ3B8N2 356 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 PLEKHG7Q6ZR37 379 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 SPATA12Q7Z6I5 190 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 SLC35E3Q7Z769 313 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 SMCR5Q8TEV8 140 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 DNAJB3Q8WWF6 145 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 SMIM19Q96E16 107 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 TMEM222Q9H0R3 208 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 EURLQ9NYK6 297 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 KLK5Q9Y337 293 aaPredicted RBP1.32□□□□□ -2.2
CD46-216ENST00000490278 AMMECR1Q9Y4X0 333 aaPredicted RBP1.32□□□□□ -2.2
CD46-216ENST00000490278 NCKAP5O14513 1909 aa1.32□□□□□ -2.2
CD46-216ENST00000490278 A0A1B0GVG6 124 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 OR6C6A6NF89 314 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 BHLHE40O14503 412 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 BIRC5O15392 142 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 NPYP01303 97 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 BPGMP07738 259 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 CASQ1P31415 396 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 GABRA2P47869 451 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 CD151P48509 253 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 TBPL1P62380 186 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 RPS24P62847 133 aaKnown RBP1.31□□□□□ -2.2
CD46-216ENST00000490278 RELAQ04206 551 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 N4BP2L1Q5TBK1 243 aaPredicted RBP1.31□□□□□ -2.2
CD46-216ENST00000490278 SFRP2Q96HF1 295 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 DHRS9Q9BPW9 319 aa1.31□□□□□ -2.2
CD46-216ENST00000490278 TMEM109Q9BVC6 243 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms