RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 Q8N6K4 173 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 OR8H1Q8NGG4 311 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 OR51S1Q8NGJ8 323 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 ZFAND1Q8TCF1 268 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 SECTM1Q8WVN6 248 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 MRGPRFQ96AM1 343 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 C5orf30Q96GV9 206 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 SLC25A21Q9BQT8 299 aaPredicted RBP10.01□□□□□ -0.81
HDAC1-210ENST00000490081 RAB18Q9NP72 206 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 CCL28Q9NRJ3 127 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 VPREB3Q9UKI3 123 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 TCF19Q9Y242 345 aa10.01□□□□□ -0.81
HDAC1-210ENST00000490081 DNAJC9-AS1A6NH13 148 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 CENPXA8MT69 81 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 H0YJW9 148 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 H3BUX3 64 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 M0R1X1 148 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 GPR31O00270 319 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 PLA2G10O15496 165 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 RBFOX2O43251 390 aaKnown RBP eCLIP10□□□□□ -0.81
HDAC1-210ENST00000490081 UPK1BO75841 260 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 MOSP00540 346 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 S100GP29377 79 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 REG1BP48304 166 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 RAB13P51153 203 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 ZNF57Q68EA5 555 aaPredicted RBP10□□□□□ -0.81
HDAC1-210ENST00000490081 DHRS7BQ6IAN0 325 aaPredicted RBP10□□□□□ -0.81
HDAC1-210ENST00000490081 C16orf87Q6PH81 154 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 ZNF818PQ6ZRF7 136 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 PDPNQ86YL7 162 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 ZNF383Q8NA42 475 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 OR13C8Q8NGS7 320 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 OR2T10Q8NGZ9 312 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 RBM14Q96PK6 669 aaKnown RBP10□□□□□ -0.81
HDAC1-210ENST00000490081 MRPL20Q9BYC9 149 aaKnown RBP10□□□□□ -0.81
HDAC1-210ENST00000490081 FXYD6Q9H0Q3 95 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 ESM1Q9NQ30 184 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 GPR132Q9UNW8 380 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 PRELID3BQ9Y3B1 194 aa10□□□□□ -0.81
HDAC1-210ENST00000490081 LINC00473A8K010 186 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 RNF212BA8MTL3 300 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 TRIM77I1YAP6 450 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 M0QZK8 103 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 PGLYRP1O75594 196 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-210ENST00000490081 B3GALNT1O75752 331 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 OR2F2O95006 317 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 CTSDP07339 412 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-210ENST00000490081 KIR2DS2P43631 304 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 LGALS7P47929 136 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 FXYD4P59646 89 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 UBA52P62987 128 aaKnown RBP9.99□□□□□ -0.81
HDAC1-210ENST00000490081 IDO2Q6ZQW0 420 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 KCTD9Q7L273 389 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 CADM3Q8N126 398 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 CD300LFQ8TDQ1 290 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 EAF1Q96JC9 268 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-210ENST00000490081 WASHC3Q9Y3C0 194 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 CUBNO60494 3623 aa9.99□□□□□ -0.81
HDAC1-210ENST00000490081 J3QRK9 145 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 FGF16O43320 207 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 APOA2P02652 100 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 SNRNP70P08621 437 aaKnown RBP9.98□□□□□ -0.81
HDAC1-210ENST00000490081 PAX6P26367 422 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 CATR1Q13166 79 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 ASAH1Q13510 395 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 TMEM177Q53S58 311 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 FAAP20Q6NZ36 180 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 CCBE1Q6UXH8 406 aaPredicted RBP9.98□□□□□ -0.81
HDAC1-210ENST00000490081 NPBQ8NG41 125 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 OR4C13Q8NGP0 309 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 OSR1Q8TAX0 266 aaPredicted RBP9.98□□□□□ -0.81
HDAC1-210ENST00000490081 CAPSLQ8WWF8 208 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 TSC22D3Q99576 134 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 RTBDNQ9BSG5 229 aaPredicted RBP9.98□□□□□ -0.81
HDAC1-210ENST00000490081 CHIAQ9BZP6 476 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 PLSCR3Q9NRY6 295 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 MCUBQ9NWR8 336 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 C1RLQ9NZP8 487 aa9.98□□□□□ -0.81
HDAC1-210ENST00000490081 LYRM1O43325 122 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 IGKV1D-33P01593 117 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 IGKV1-33P01594 117 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 F2RP25116 425 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 BRWD1-AS2P59051 145 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 RPL30P62888 115 aaKnown RBP9.97□□□□□ -0.81
HDAC1-210ENST00000490081 RBMS2Q15434 407 aaKnown RBP9.97□□□□□ -0.81
HDAC1-210ENST00000490081 RTL8BQ17RB0 113 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 DRAXINQ8NBI3 349 aaPredicted RBP9.97□□□□□ -0.81
HDAC1-210ENST00000490081 MARCH1Q8TCQ1 289 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 FLYWCH2Q96CP2 140 aaKnown RBP9.97□□□□□ -0.81
HDAC1-210ENST00000490081 AIFM2Q9BRQ8 373 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 PALMDQ9NP74 551 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 SLC2A9Q9NRM0 540 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 SLC35D1Q9NTN3 355 aa9.97□□□□□ -0.81
HDAC1-210ENST00000490081 COL6A5A8TX70 2615 aa9.96□□□□□ -0.81
HDAC1-210ENST00000490081 MPPED1O15442 326 aa9.96□□□□□ -0.82
HDAC1-210ENST00000490081 GPR137BO60478 399 aa9.96□□□□□ -0.82
HDAC1-210ENST00000490081 NDUFB6O95139 128 aa9.96□□□□□ -0.82
HDAC1-210ENST00000490081 NDUFA3O95167 84 aa9.96□□□□□ -0.82
HDAC1-210ENST00000490081 SPDEFO95238 335 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms