RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 RBKSQ9H477 322 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 POMKQ9H5K3 350 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM185BQ9H7F4 350 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 METTL17Q9H7H0 456 aaPredicted RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 FN3KRPQ9HA64 309 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TAF9BQ9HBM6 251 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TUBG2Q9NRH3 451 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 UQCC1Q9NVA1 299 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TXNL4BQ9NX01 149 aaKnown RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 MS4A12Q9NXJ0 267 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TAS2R5Q9NYW4 299 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 AHSPQ9NZD4 102 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 IL36GQ9NZH8 169 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 COMMD3Q9UBI1 195 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 VPS29Q9UBQ0 182 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 NAT8Q9UHE5 227 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 CLEC2DQ9UHP7 191 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 RABAC1Q9UI14 185 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 NAGKQ9UJ70 344 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 TRAPPC2LQ9UL33 140 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 MMACHCQ9Y4U1 282 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 S4R3C0 116 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 LAMB1P07942 1786 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 RBBP6Q7Z6E9 1792 aaKnown RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 PAPPA2Q9BXP8 1791 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 ARFGEF2Q9Y6D5 1785 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 KIAA0100Q14667 2235 aaKnown RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 AFDNP55196 1824 aaKnown RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 PSME4Q14997 1843 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 ZFC3H1O60293 1989 aaKnown RBP1.56□□□□□ -2.16
HMGN1-218ENST00000490032 PIEZO1Q92508 2521 aa1.56□□□□□ -2.16
HMGN1-218ENST00000490032 PCNTO95613 3336 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SCN7AQ01118 1682 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TJP1Q07157 1748 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TTC28Q96AY4 2481 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ANKRD31Q8N7Z5 1873 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 FXYD6-FXYD2A0A087WZ82 144 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SERTM2A0A1B0GWG4 89 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 MAP1LC3B2A6NCE7 125 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ARRDC5A6NEK1 342 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR2AG2A6NM03 316 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM238C9JI98 176 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 C9JVG2 144 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 E7EQ34 232 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 H3BN98 237 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 GABARAPH6UMI1 98 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 K7EPK0 472 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 DNASE2O00115 360 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 HAS3O00219 553 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 GABRPO00591 440 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CXCL11O14625 94 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 AZIN1O14977 448 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ARPC5O15511 151 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TCF21O43680 179 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 GSTZ1O43708 216 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 KLRC4O43908 158 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SOX15O60248 233 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TBX19O60806 448 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SMPD2O60906 423 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 EEDO75530 441 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ADAP1O75689 374 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 GLSO94925 669 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR2A4O95047 310 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF682O95780 498 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CST4P01036 141 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 HLA-HP01893 362 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 APOA2P02652 100 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PMP2P02689 132 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PPBPP02775 128 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SERPINA7P05543 415 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CTXN2P0C2S0 81 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLC35E2BP0CK96 405 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SMIM17P0DL12 118 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SULT1A3P0DMM9 295 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SULT1A4P0DMN0 295 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR8G3PP0DMU2 310 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SLC25A4P12235 298 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CCL5P13501 91 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF250P15622 560 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CBR1P16152 277 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ATF1P18846 271 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 KITLGP21583 273 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RPS4Y1P22090 263 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 USF1P22415 310 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 GRPRP30550 384 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CAMLGP49069 296 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CX3CR1P49238 355 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 RGS4P49798 205 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ERFP50548 548 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 PPT1P50897 306 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 CRYBB1P53674 252 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 TCL1AP56279 114 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 S100A10P60903 97 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 UBE2MP61081 183 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 UBE2KP61086 200 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 SNRPGP62308 76 aaKnown RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 HBA1P69905 142 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 BAXQ07812 192 aa1.55□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF816Q0VGE8 651 aaPredicted RBP1.55□□□□□ -2.16
HMGN1-218ENST00000490032 OR5I1Q13606 314 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms