RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 ANKRD13BQ86YJ7 626 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 GVQW1Q8N7I0 195 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 ABHD5Q8WTS1 349 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 OR51J1Q9H342 316 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 IFT46Q9NQC8 304 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 ZFP57Q9NU63 452 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 OR2W1Q9Y3N9 320 aa10.54□□□□□ -0.72
CCL28-202ENST00000489442 SLC22A5O76082 557 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 IGKV1-16P04430 117 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 IGF1P05019 195 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 FCER2P06734 321 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 PTHLHP12272 177 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 THBS3P49746 956 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 DEFA6Q01524 100 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 RTL8BQ17RB0 113 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 HOGA1Q86XE5 327 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 ACOT12Q8WYK0 555 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 ADTRPQ96IZ2 230 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 CLCC1Q96S66 551 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 NAA50Q9GZZ1 169 aaKnown RBP10.53□□□□□ -0.72
CCL28-202ENST00000489442 METTL1Q9UBP6 276 aaKnown RBP10.53□□□□□ -0.72
CCL28-202ENST00000489442 WSB1Q9Y6I7 421 aa10.53□□□□□ -0.72
CCL28-202ENST00000489442 IGHV7-81A0A0B4J1V7 117 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 MEIS3P1A6NDR6 274 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 ATP6V0E1O15342 81 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 RRASP10301 218 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 CD33P20138 364 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 RPL23AP62750 156 aaKnown RBP10.52□□□□□ -0.73
CCL28-202ENST00000489442 FOXE3Q13461 319 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 PSG5Q15238 335 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 MZT2AQ6P582 158 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 TMEM65Q6PI78 240 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 ZNF645Q8N7E2 425 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 BVESQ8NE79 360 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 AP3S1Q92572 193 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 NECAP2Q9NVZ3 263 aa10.52□□□□□ -0.73
CCL28-202ENST00000489442 MRPS7Q9Y2R9 242 aaKnown RBP10.52□□□□□ -0.73
CCL28-202ENST00000489442 TRAV41A0A0B4J266 112 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 G3V318 75 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 SHOXO15266 292 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 SLC25A17O43808 307 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 TUSC2O75896 110 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 GABARAPO95166 117 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 SPDEFO95238 335 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 HLA-DQB1P01920 261 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 ELANEP08246 267 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 FCGR2CP31995 323 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 PRSS3P35030 304 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 LGALS7P47929 136 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 TAS2R20P59543 309 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 CX3CL1P78423 397 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 TMEM267Q0VDI3 215 aaPredicted RBP10.51□□□□□ -0.73
CCL28-202ENST00000489442 CTF1Q16619 201 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 ZNF660Q6AZW8 331 aaPredicted RBP10.51□□□□□ -0.73
CCL28-202ENST00000489442 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 ZNF695Q8IW36 515 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 KLHL30-AS1Q8NEE0 82 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 HARBI1Q96MB7 349 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 PRELID3BQ9Y3B1 194 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 A3GALT2U3KPV4 340 aa10.51□□□□□ -0.73
CCL28-202ENST00000489442 TNCP24821 2201 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 FAM25AB3EWG3 89 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 FAM25CB3EWG5 89 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 FAM25GB3EWG6 89 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 FCN1O00602 326 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 CNIH1O95406 144 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 IGHG4P01861 327 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 APOA1P02647 267 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 RPLP1P05386 114 aaKnown RBP10.5□□□□□ -0.73
CCL28-202ENST00000489442 EIF4EP06730 217 aaKnown RBP10.5□□□□□ -0.73
CCL28-202ENST00000489442 SLC6A1P30531 599 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 DUTP33316 252 aaKnown RBP10.5□□□□□ -0.73
CCL28-202ENST00000489442 ALDH3B2P48448 385 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 ECSCRQ19T08 205 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 LCNL1Q6ZST4 164 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 OR5AP2Q8NGF4 316 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 CMTM3Q96MX0 182 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 DCUN1D5Q9BTE7 237 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 ZNF580Q9UK33 172 aa10.5□□□□□ -0.73
CCL28-202ENST00000489442 IGKV1D-13A0A0B4J2D9 117 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 LINC00473A8K010 186 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 G3V4G9 280 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 HPGDSO60760 199 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 CRYZL1O95825 349 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 CA2P00918 260 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 IGKV1-13P0DP09 117 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 ZNF182P17025 639 aaPredicted RBP10.49□□□□□ -0.73
CCL28-202ENST00000489442 GNB1P62873 340 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 CDK10Q15131 360 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 ZNF562Q6V9R5 426 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 C8orf86Q6ZUL3 223 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 KCTD9Q7L273 389 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 PPP1R27Q86WC6 154 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 CLVS1Q8IUQ0 354 aaPredicted RBP10.49□□□□□ -0.73
CCL28-202ENST00000489442 SECTM1Q8WVN6 248 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
CCL28-202ENST00000489442 RBMX2Q9Y388 322 aaKnown RBP10.49□□□□□ -0.73
CCL28-202ENST00000489442 FCGR3BO75015 233 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 ELK1P19419 428 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 AADACP22760 399 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms