RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 MGAT4AQ9UM21 535 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 LSM2Q9Y333 95 aaKnown RBP9.48□□□□□ -0.89
CPSF3-204ENST00000489403 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
CPSF3-204ENST00000489403 C13orf42A0A1B0GVH6 325 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 ANKRD34BA5PLL1 514 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 APOA2P02652 100 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 TMEM50BP56557 158 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 DEFA5Q01523 94 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 P2RY14Q15391 338 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 RNLSQ5VYX0 342 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 IL34Q6ZMJ4 242 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 FAM89BQ8N5H3 189 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 OR5T1Q8NG75 326 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 ISOC1Q96CN7 298 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 SLC35D1Q9NTN3 355 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 RDH8Q9NYR8 311 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 ZNF221Q9UK13 617 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 HSF4Q9ULV5 492 aa9.47□□□□□ -0.89
CPSF3-204ENST00000489403 A0A0G2JLM5 398 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 M0R1X1 148 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 SLC17A2O00624 439 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 IGLV2-23P01705 113 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 CRYGBP07316 175 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 ARSBP15848 533 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 PJVKQ0ZLH3 352 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 KLF5Q13887 457 aaPredicted RBP9.46□□□□□ -0.9
CPSF3-204ENST00000489403 RCN1Q15293 331 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 SPHARQ15513 63 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 MOGAT2Q3SYC2 334 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 OGFRL1Q5TC84 451 aaPredicted RBP9.46□□□□□ -0.9
CPSF3-204ENST00000489403 OR9G4Q8NGQ1 327 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 ARHGAP5-AS1Q96IT6 56 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 CMSS1Q9BQ75 279 aaKnown RBP9.46□□□□□ -0.9
CPSF3-204ENST00000489403 PECRQ9BY49 303 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 ADAM30Q9UKF2 790 aa9.46□□□□□ -0.9
CPSF3-204ENST00000489403 TRDCB7Z8K6 153 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 EBAG9O00559 213 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 CNIH1O95406 144 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 CD3GP09693 182 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 VEGFCP49767 419 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 SYNJ2BPP57105 145 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 MED22Q15528 200 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 PLAC9Q5JTB6 97 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 LIPKQ5VXJ0 399 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 TMEM91Q6ZNR0 172 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.45□□□□□ -0.9
CPSF3-204ENST00000489403 TMEM203Q969S6 136 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 HARBI1Q96MB7 349 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 THAP7Q9BT49 309 aaPredicted RBP9.45□□□□□ -0.9
CPSF3-204ENST00000489403 OR2D2Q9H210 308 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 PLGRKTQ9HBL7 147 aa9.45□□□□□ -0.9
CPSF3-204ENST00000489403 AK6Q9Y3D8 172 aaKnown RBP9.45□□□□□ -0.9
CPSF3-204ENST00000489403 PTGES3LE9PB15 166 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 H0Y980 276 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 CASQ2O14958 399 aaPredicted RBP9.44□□□□□ -0.9
CPSF3-204ENST00000489403 BRI3O95415 125 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 CLDN12P56749 244 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 RPS25P62851 125 aaKnown RBP9.44□□□□□ -0.9
CPSF3-204ENST00000489403 DYRK1AQ13627 763 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 HAGHQ16775 308 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 ZNF343Q6P1L6 599 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 UFD1Q92890 307 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 C5orf30Q96GV9 206 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 TMEM68Q96MH6 324 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 TINAGL1Q9GZM7 467 aaPredicted RBP9.44□□□□□ -0.9
CPSF3-204ENST00000489403 SDHAF2Q9NX18 166 aa9.44□□□□□ -0.9
CPSF3-204ENST00000489403 PEF1Q9UBV8 284 aaKnown RBP9.44□□□□□ -0.9
CPSF3-204ENST00000489403 SRRM4A7MD48 611 aaKnown RBP9.43□□□□□ -0.9
CPSF3-204ENST00000489403 RBMXL2O75526 392 aaKnown RBP9.43□□□□□ -0.9
CPSF3-204ENST00000489403 CSN3P07498 182 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 AADACP22760 399 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 LGALS7P47929 136 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 SERPINB10P48595 397 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 PLA2G7Q13093 441 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 IRF3Q14653 427 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 RAB11BQ15907 218 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 MRGPRG-AS1Q2M3A8 158 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 IGSF11Q5DX21 431 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 BVESQ8NE79 360 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 OR56B1Q8NGI3 324 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 OR4A4PQ8NGN8 299 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 CABLES2Q9BTV7 478 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 COA4Q9NYJ1 87 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 SIGLEC8Q9NYZ4 499 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 KCNK7Q9Y2U2 307 aa9.43□□□□□ -0.9
CPSF3-204ENST00000489403 IZUMO1RA6ND01 250 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 BET1O15155 118 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 SHOXO15266 292 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 FABP7O15540 132 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 FCGR3AP08637 254 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 APELAP0DMC3 54 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 RPEL1Q2QD12 228 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 C2orf76Q3KRA6 126 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 TMEM177Q53S58 311 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
CPSF3-204ENST00000489403 Q8N402 240 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms