RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 PARP11Q9NR21 331 aa18.83■□□□□ 0.6
PTPN18-213ENST00000489215 ANXA10Q9UJ72 324 aa18.83■□□□□ 0.6
PTPN18-213ENST00000489215 TRAV41A0A0B4J266 112 aa18.82■□□□□ 0.6
PTPN18-213ENST00000489215 ATP6V0E1O15342 81 aa18.82■□□□□ 0.6
PTPN18-213ENST00000489215 PSMB8P28062 276 aa18.82■□□□□ 0.6
PTPN18-213ENST00000489215 RTL8BQ17RB0 113 aa18.82■□□□□ 0.6
PTPN18-213ENST00000489215 SLC25A38Q96DW6 304 aa18.82■□□□□ 0.6
PTPN18-213ENST00000489215 RBMXL1Q96E39 390 aaKnown RBP18.82■□□□□ 0.6
PTPN18-213ENST00000489215 MCRIP2Q9BUT9 160 aaKnown RBP18.82■□□□□ 0.6
PTPN18-213ENST00000489215 METTL1Q9UBP6 276 aaKnown RBP18.82■□□□□ 0.6
PTPN18-213ENST00000489215 OR2W1Q9Y3N9 320 aa18.82■□□□□ 0.6
PTPN18-213ENST00000489215 IGKV1D-8A0A087WSZ0 117 aa18.81■□□□□ 0.6
PTPN18-213ENST00000489215 RPLP1P05386 114 aaKnown RBP18.81■□□□□ 0.6
PTPN18-213ENST00000489215 PPIFP30405 207 aaKnown RBP18.81■□□□□ 0.6
PTPN18-213ENST00000489215 RPS19P39019 145 aaKnown RBP18.81■□□□□ 0.6
PTPN18-213ENST00000489215 CBX5P45973 191 aa18.81■□□□□ 0.6
PTPN18-213ENST00000489215 LUMP51884 338 aaPredicted RBP18.81■□□□□ 0.6
PTPN18-213ENST00000489215 CRIP2P52943 208 aaPredicted RBP18.81■□□□□ 0.6
PTPN18-213ENST00000489215 CX3CL1P78423 397 aa18.81■□□□□ 0.6
PTPN18-213ENST00000489215 PSG5Q15238 335 aa18.81■□□□□ 0.6
PTPN18-213ENST00000489215 OXLD1Q5BKU9 147 aa18.81■□□□□ 0.6
PTPN18-213ENST00000489215 ZNF562Q6V9R5 426 aa18.81■□□□□ 0.6
PTPN18-213ENST00000489215 KCTD12Q96CX2 325 aaKnown RBP18.81■□□□□ 0.6
PTPN18-213ENST00000489215 IGKV1-16P04430 117 aa18.8■□□□□ 0.6
PTPN18-213ENST00000489215 UBE2NLQ5JXB2 153 aa18.8■□□□□ 0.6
PTPN18-213ENST00000489215 C8orf86Q6ZUL3 223 aa18.8■□□□□ 0.6
PTPN18-213ENST00000489215 ZNF645Q8N7E2 425 aa18.8■□□□□ 0.6
PTPN18-213ENST00000489215 WSB1Q9Y6I7 421 aa18.8■□□□□ 0.6
PTPN18-213ENST00000489215 XRCC3O43542 346 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 SSX5O60225 188 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 HLA-DQB1P01920 261 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 CD40LGP29965 261 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 ARPC4P59998 168 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 LSM3P62310 102 aaKnown RBP18.79■□□□□ 0.6
PTPN18-213ENST00000489215 LINC00482Q8N8I6 264 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 BEST4Q8NFU0 473 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 UBE2E2Q96LR5 201 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 FUNDC2Q9BWH2 189 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 AUNIPQ9H7T9 357 aa18.79■□□□□ 0.6
PTPN18-213ENST00000489215 NOTCH3Q9UM47 2321 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 IGLV1-40P01703 118 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 AKIRIN2Q53H80 203 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 PYHIN1Q6K0P9 492 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 PPP1R27Q86WC6 154 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 HOGA1Q86XE5 327 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 MRPL41Q8IXM3 137 aaKnown RBP18.78■□□□□ 0.6
PTPN18-213ENST00000489215 MINDY2Q8NBR6 621 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 ABHD5Q8WTS1 349 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 C4orf3Q8WVX3 66 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 SLC25A46Q96AG3 418 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 P2RX4Q99571 388 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 NECAP2Q9NVZ3 263 aa18.78■□□□□ 0.6
PTPN18-213ENST00000489215 G3V318 75 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 CCL24O00175 119 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 SHOXO15266 292 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 IGLL1P15814 213 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 DUTP33316 252 aaKnown RBP18.77■□□□□ 0.6
PTPN18-213ENST00000489215 TMEM177Q53S58 311 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 OR13F1Q8NGS4 319 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 CMTM3Q96MX0 182 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 PRELID3BQ9Y3B1 194 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 NUBP2Q9Y5Y2 271 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 CMYA5Q8N3K9 4069 aa18.77■□□□□ 0.6
PTPN18-213ENST00000489215 FCN1O00602 326 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 NFYAP23511 347 aaPredicted RBP18.76■□□□□ 0.59
PTPN18-213ENST00000489215 TGFBR1P36897 503 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 LINC00205P59089 165 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 ETV3LQ6ZN32 361 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 BVESQ8NE79 360 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 OR5M8Q8NGP6 311 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 OSR1Q8TAX0 266 aaPredicted RBP18.76■□□□□ 0.59
PTPN18-213ENST00000489215 MYOZ3Q8TDC0 251 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 DPF1Q92782 380 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 HARBI1Q96MB7 349 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 ZMAT5Q9UDW3 170 aaKnown RBP18.76■□□□□ 0.59
PTPN18-213ENST00000489215 FOXA2Q9Y261 457 aaPredicted RBP18.76■□□□□ 0.59
PTPN18-213ENST00000489215 VSIG4Q9Y279 399 aa18.76■□□□□ 0.59
PTPN18-213ENST00000489215 SLC25A17O43808 307 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 RAB9AP51151 201 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 ECSCRQ19T08 205 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 C18orf65Q6ZTR6 163 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 SAMD12Q8N8I0 201 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 ACOT12Q8WYK0 555 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 TMEM68Q96MH6 324 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 CLCC1Q96S66 551 aa18.75■□□□□ 0.59
PTPN18-213ENST00000489215 MRPS7Q9Y2R9 242 aaKnown RBP18.75■□□□□ 0.59
PTPN18-213ENST00000489215 A0A1W2PN81 502 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 CNIH1O95406 144 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 CA2P00918 260 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 CHRNA7P36544 502 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 VMA21Q3ZAQ7 101 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 TMEM69Q5SWH9 247 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 LCNL1Q6ZST4 164 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 ZNF491Q8N8L2 437 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 DDB2Q92466 427 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 RAX2Q96IS3 184 aa18.74■□□□□ 0.59
PTPN18-213ENST00000489215 HSD17B10Q99714 261 aaKnown RBP18.74■□□□□ 0.59
PTPN18-213ENST00000489215 SMIM31A0A1B0GVY4 71 aa18.73■□□□□ 0.59
PTPN18-213ENST00000489215 TUSC2O75896 110 aa18.73■□□□□ 0.59
PTPN18-213ENST00000489215 RUNX1Q01196 453 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms