RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TNFRSF9Q07011 255 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 FAM181AQ8N9Y4 354 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 DLL1O00548 723 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 MPDU1O75352 247 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 SOD3P08294 240 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 DANCRP0C864 163 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 RND2P52198 227 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 POC1AQ8NBT0 407 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 AUP1Q9Y679 476 aa15.12■□□□□ 0.01
NPHP4-209ENST00000489180 CCL21O00585 134 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 RPL8P62917 257 aaKnown RBP15.11■□□□□ 0.01
NPHP4-209ENST00000489180 LINC00518Q8N0U6 118 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 HIST1H2BAQ96A08 127 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 PLXNB2O15031 1838 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 TRGC1P0CF51 173 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 SMIM10L1P0DMW3 83 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 AGAP20933 346 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 CD82P27701 267 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 SMIM10Q96HG1 83 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 NEU1Q99519 415 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 NAT2P11245 290 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 PRF1P14222 555 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 CRYBB3P26998 211 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 DDTP30046 118 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 ATOH7Q8N100 152 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 AMY1AP04745 511 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 GUCD1Q96NT3 240 aa15.11■□□□□ 0.01
NPHP4-209ENST00000489180 NKX2-8O15522 239 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 CKS2P33552 79 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 CKAP5Q14008 2032 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 PMS2CLQ68D20 193 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 ABHD12Q8N2K0 398 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 GCSAMQ8N6F7 178 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 RAB37Q96AX2 223 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 PTPRZ1P23471 2315 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-209ENST00000489180 IGHV3-48P01763 117 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 EGR1P18146 543 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 RPS11P62280 158 aaKnown RBP eCLIP15.1■□□□□ 0.01
NPHP4-209ENST00000489180 OR4A5Q8NH83 315 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 SCNM1Q9BWG6 230 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 MARCH11A6NNE9 402 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 MT-ND6P03923 174 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 SRIP30626 198 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 CRYBA2P53672 197 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 ZNF738Q8NE65 137 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 CTHRC1Q96CG8 243 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 OR51M1Q9H341 326 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 CBLN4Q9NTU7 201 aa15.1■□□□□ 0.01
NPHP4-209ENST00000489180 MAS1LP35410 378 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 TMEM177Q53S58 311 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 WNT5BQ9H1J7 359 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 CALYQ9NYX4 217 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 COL24A1Q17RW2 1714 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 SLC25A17O43808 307 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 TMEM74BQ9NUR3 256 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 PTPRFP10586 1907 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 TMEM14DPA8MWL7 114 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 B4E171 279 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 TSPAN7P41732 249 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 KCNMB1Q16558 191 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 PARLQ9H300 379 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A10PA6NDY2 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A18PA6NE21 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A16PA6NEW6 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A20PA6NIJ5 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A8PA6NJQ4 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A7PA6NKC0 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A22PA8MWA6 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A12PA8MX19 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A5PA8MXJ8 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A23PA8MXZ1 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 KLF4O43474 513 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A15PP0C7V4 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A13PP0C7W8 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A14PP0C7W9 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FAM90A24PP0C7X0 464 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 ZNF708P17019 499 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 GLIPR1P48060 266 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 CDCP2Q5VXM1 449 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 DYNLRB2Q8TF09 96 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 QTRT1Q9BXR0 403 aaKnown RBP15.09■□□□□ 0.01
NPHP4-209ENST00000489180 TMEM229AB2RXF0 380 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 CDK2AP1O14519 115 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 STAG3L2P0CL84 134 aa15.09■□□□□ 0.01
NPHP4-209ENST00000489180 FCGR2BP31994 310 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-209ENST00000489180 ZNF430Q9H8G1 570 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-209ENST00000489180 ODAMA1E959 279 aa15.08■□□□□ 0.01
NPHP4-209ENST00000489180 LEPROTL1O95214 131 aa15.08■□□□□ 0.01
NPHP4-209ENST00000489180 DNLZQ5SXM8 178 aa15.08■□□□□ 0.01
NPHP4-209ENST00000489180 TMEM78Q5T7P6 136 aa15.08■□□□□ 0.01
NPHP4-209ENST00000489180 TMEM45BQ96B21 275 aa15.08■□□□□ 0.01
NPHP4-209ENST00000489180 C16orf92Q96LL3 132 aa15.08■□□□□ 0.01
NPHP4-209ENST00000489180 HS3ST3B1Q9Y662 390 aa15.08■□□□□ 0.01
NPHP4-209ENST00000489180 GAGE10A6NGK3 116 aa15.08■□□□□ 0
NPHP4-209ENST00000489180 ID1P41134 155 aa15.08■□□□□ 0
NPHP4-209ENST00000489180 ERVFRD-1P60508 538 aa15.08■□□□□ 0
NPHP4-209ENST00000489180 ASPHD2Q6ICH7 369 aa15.08■□□□□ 0
NPHP4-209ENST00000489180 RGPD4Q7Z3J3 1758 aa15.08■□□□□ 0
NPHP4-209ENST00000489180 IGKV3D-15A0A087WSY6 115 aa15.08■□□□□ 0
NPHP4-209ENST00000489180 IGKV3-15P01624 115 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms