RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 RBBP9O75884 186 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 CA2P00918 260 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 APOA2P02652 100 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 FGF9P31371 208 aaPredicted RBP10.9□□□□□ -0.66
VTI1A-206ENST00000489142 TALDO1P37837 337 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 RAB9AP51151 201 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 C19orf54Q5BKX5 351 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 ASPHD1Q5U4P2 390 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 MINDY2Q8NBR6 621 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 OR5M8Q8NGP6 311 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 LGALS14Q8TCE9 139 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 NUDCD2Q8WVJ2 157 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 GINS4Q9BRT9 223 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 MCRIP2Q9BUT9 160 aaKnown RBP10.9□□□□□ -0.66
VTI1A-206ENST00000489142 GHITMQ9H3K2 345 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 SLC35D1Q9NTN3 355 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 SSR3Q9UNL2 185 aa10.9□□□□□ -0.66
VTI1A-206ENST00000489142 TMEM235A6NFC5 223 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 SDC2P34741 201 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 SERPINB10P48595 397 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 FHL3Q13643 280 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 CDNFQ49AH0 187 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 ZNF660Q6AZW8 331 aaPredicted RBP10.89□□□□□ -0.67
VTI1A-206ENST00000489142 SFXN4Q6P4A7 337 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 UNQ5815/PRO19632Q6UWF5 114 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 PPP1R27Q86WC6 154 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 GRPEL2Q8TAA5 225 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 MS4A10Q96PG2 267 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 ST6GALNAC5Q9BVH7 336 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 YTHDF1Q9BYJ9 559 aaKnown RBP10.89□□□□□ -0.67
VTI1A-206ENST00000489142 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 TOLLIPQ9H0E2 274 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 FOXA2Q9Y261 457 aaPredicted RBP10.89□□□□□ -0.67
VTI1A-206ENST00000489142 VSIG4Q9Y279 399 aa10.89□□□□□ -0.67
VTI1A-206ENST00000489142 RBM7Q9Y580 266 aaKnown RBP10.89□□□□□ -0.67
VTI1A-206ENST00000489142 SEC14L6B5MCN3 397 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 I3L521 148 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 PJVKQ0ZLH3 352 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 TPRA1Q86W33 373 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 PDPNQ86YL7 162 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-206ENST00000489142 BVESQ8NE79 360 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 LFNGQ8NES3 379 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 OR1N2Q8NGR9 330 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 OR5H6Q8NGV6 325 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 FLYWCH2Q96CP2 140 aaKnown RBP10.88□□□□□ -0.67
VTI1A-206ENST00000489142 UBE2E2Q96LR5 201 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 TSNAXQ99598 290 aaKnown RBP10.88□□□□□ -0.67
VTI1A-206ENST00000489142 CENPOQ9BU64 300 aa10.88□□□□□ -0.67
VTI1A-206ENST00000489142 ARPC1BO15143 372 aaKnown RBP10.87□□□□□ -0.67
VTI1A-206ENST00000489142 IGLV2-23P01705 113 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 IGHV3-11P01762 117 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 CD36P16671 472 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 TGFBR1P36897 503 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 CRIP2P52943 208 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-206ENST00000489142 SLURP1P55000 103 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 DGCR2P98153 550 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 FXYD3Q14802 87 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 ACTBL2Q562R1 376 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 IDNKQ5T6J7 187 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 HACD4Q5VWC8 232 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 H1FOOQ8IZA3 346 aaPredicted RBP10.87□□□□□ -0.67
VTI1A-206ENST00000489142 ARPC1AQ92747 370 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 HARBI1Q96MB7 349 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 PRR25Q96S07 402 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 RNF5Q99942 180 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
VTI1A-206ENST00000489142 SRRM4A7MD48 611 aaKnown RBP10.86□□□□□ -0.67
VTI1A-206ENST00000489142 SSX5O60225 188 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 SPDEFO95238 335 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 NFYAP23511 347 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-206ENST00000489142 ECI1P42126 302 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 TPPP2P59282 170 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 SSBP2P81877 361 aaPredicted RBP10.86□□□□□ -0.67
VTI1A-206ENST00000489142 ZNF616Q08AN1 781 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 ZNF260Q3ZCT1 412 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 C9orf66Q5T8R8 295 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 C11orf87Q6NUJ2 197 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 SLC25A38Q96DW6 304 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.86□□□□□ -0.67
VTI1A-206ENST00000489142 RHBDL2Q9NX52 303 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 SCOCQ9UIL1 159 aa10.86□□□□□ -0.67
VTI1A-206ENST00000489142 IGHV4OR15-8A0A075B7B6 117 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 A0A087WW49 117 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 LINC00473A8K010 186 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 SHOXO15266 292 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 CNIH1O95406 144 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 FCER2P06734 321 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 OR8U8P0C7N1 319 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 APELAP0DMC3 54 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 DTYMKP23919 212 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 GNG2P59768 71 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 RUNX1Q01196 453 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 DEFA5Q01523 94 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 TMEM267Q0VDI3 215 aaPredicted RBP10.85□□□□□ -0.67
VTI1A-206ENST00000489142 KCTD21Q4G0X4 260 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 OR2B11Q5JQS5 317 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 ZNF562Q6V9R5 426 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 IDO2Q6ZQW0 420 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms