RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ZNF660Q6AZW8 331 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-218ENST00000489037 ANKRD13BQ86YJ7 626 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 BEST4Q8NFU0 473 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 ABHD5Q8WTS1 349 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 FBXL15Q9H469 300 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 IFT46Q9NQC8 304 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 METTL1Q9UBP6 276 aaKnown RBP11.24□□□□□ -0.61
BRCA1-218ENST00000489037 ZNF580Q9UK33 172 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 OR2W1Q9Y3N9 320 aa11.24□□□□□ -0.61
BRCA1-218ENST00000489037 IGHV7-81A0A0B4J1V7 117 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 SMIM18P0DKX4 95 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 NFYAP23511 347 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-218ENST00000489037 LGALS7P47929 136 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 RORCP51449 518 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 TMEM267Q0VDI3 215 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-218ENST00000489037 PSG5Q15238 335 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 MZT2AQ6P582 158 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 TMEM65Q6PI78 240 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 GPR141Q7Z602 305 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 HOGA1Q86XE5 327 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 ZNF645Q8N7E2 425 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 ACOT12Q8WYK0 555 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 NECAP2Q9NVZ3 263 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 COMMD3Q9UBI1 195 aa11.23□□□□□ -0.61
BRCA1-218ENST00000489037 TRAV41A0A0B4J266 112 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 SHOXO15266 292 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 ATP6V0E1O15342 81 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 IGHG4P01861 327 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 HLA-DQB1P01920 261 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 IGKV1-16P04430 117 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 NOTCH1P46531 2555 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 GPR107Q5VW38 600 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 ZNF695Q8IW36 515 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 BVESQ8NE79 360 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 AP3S1Q92572 193 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 CMTM3Q96MX0 182 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 CLCC1Q96S66 551 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 PRELID3BQ9Y3B1 194 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
BRCA1-218ENST00000489037 SLC25A17O43808 307 aa11.21□□□□□ -0.61
BRCA1-218ENST00000489037 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.61
BRCA1-218ENST00000489037 LINC00205P59089 165 aa11.21□□□□□ -0.61
BRCA1-218ENST00000489037 TAS2R20P59543 309 aa11.21□□□□□ -0.61
BRCA1-218ENST00000489037 CX3CL1P78423 397 aa11.21□□□□□ -0.61
BRCA1-218ENST00000489037 C1QL4Q86Z23 238 aa11.21□□□□□ -0.61
BRCA1-218ENST00000489037 GVQW1Q8N7I0 195 aa11.21□□□□□ -0.61
BRCA1-218ENST00000489037 HARBI1Q96MB7 349 aa11.21□□□□□ -0.61
BRCA1-218ENST00000489037 TUSC2O75896 110 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 GABARAPO95166 117 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 CNIH1O95406 144 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 APOA1P02647 267 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 CD40LGP29965 261 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 FCGR2CP31995 323 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 DUTP33316 252 aaKnown RBP11.2□□□□□ -0.62
BRCA1-218ENST00000489037 PRSS3P35030 304 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 MYCNOSP40205 109 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 VMA21Q3ZAQ7 101 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 TCTEX1D1Q8N7M0 179 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 OR5AP2Q8NGF4 316 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
BRCA1-218ENST00000489037 A3GALT2U3KPV4 340 aa11.2□□□□□ -0.62
BRCA1-218ENST00000489037 MEIS3P1A6NDR6 274 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 FAM25AB3EWG3 89 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 FAM25CB3EWG5 89 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 FAM25GB3EWG6 89 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 G3V318 75 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 G3V4G9 280 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 FCN1O00602 326 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
BRCA1-218ENST00000489037 CA2P00918 260 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 FCER2P06734 321 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 PTHLHP12272 177 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 CDX1P47902 265 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-218ENST00000489037 CFHR3Q02985 330 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 CDK10Q15131 360 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 TMEM177Q53S58 311 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 KCTD9Q7L273 389 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 PPP1R27Q86WC6 154 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 RNF152Q8N8N0 203 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 WFDC9Q8NEX5 89 aa11.19□□□□□ -0.62
BRCA1-218ENST00000489037 OSR1Q8TAX0 266 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-218ENST00000489037 HSD17B10Q99714 261 aaKnown RBP11.19□□□□□ -0.62
BRCA1-218ENST00000489037 NAA50Q9GZZ1 169 aaKnown RBP11.19□□□□□ -0.62
BRCA1-218ENST00000489037 RBMX2Q9Y388 322 aaKnown RBP11.19□□□□□ -0.62
BRCA1-218ENST00000489037 A0A1W2PN81 502 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 CRYZL1O95825 349 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 EIF4EP06730 217 aaKnown RBP11.18□□□□□ -0.62
BRCA1-218ENST00000489037 ZNF182P17025 639 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-218ENST00000489037 PSMB8P28062 276 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
BRCA1-218ENST00000489037 CHRNA7P36544 502 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 ALDH3B2P48448 385 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 HERV-K104P61576 105 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 GNB1P62873 340 aa11.18□□□□□ -0.62
BRCA1-218ENST00000489037 FXYD3Q14802 87 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms