RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PDPNQ86YL7 162 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 OR10J5Q8NHC4 309 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 UBE2E2Q96LR5 201 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 DUX3Q96PT4 197 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 TSNAXQ99598 290 aaKnown RBP10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 DCSTAMPQ9H295 470 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 FBXL15Q9H469 300 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 RNF150Q9ULK6 438 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 KCNK7Q9Y2U2 307 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 WSB1Q9Y6I7 421 aa10.79□□□□□ -0.68
SPTLC1-207ENST00000488921 IGKV1-6A0A0C4DH72 117 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 G3V318 75 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 H3BMQ9 156 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 RAB27BO00194 218 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 BET1O15155 118 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 TMEM127O75204 238 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 IGLV1-40P01703 118 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 RPS19P39019 145 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 RORCP51449 518 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 CRIP2P52943 208 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 TMEM267Q0VDI3 215 aaPredicted RBP10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 CBX3Q13185 183 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 SRSF7Q16629 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 ECSCRQ19T08 205 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 PYHIN1Q6K0P9 492 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 ABHD5Q8WTS1 349 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 ATG5Q9H1Y0 275 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 METTL1Q9UBP6 276 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 VSIG4Q9Y279 399 aa10.78□□□□□ -0.68
SPTLC1-207ENST00000488921 TRBV6-7A0A0A0MS04 114 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 A0A1W2PN81 502 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 SMIM30A4D0T7 59 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 K7EIL1 84 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 M0R1X1 148 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 CLEC2LP0C7M8 214 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 OR8U8P0C7N1 319 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 DTYMKP23919 212 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 CHRNA7P36544 502 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 TGFBR1P36897 503 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 KRTAP10-11P60412 298 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 NDPQ00604 133 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 RUNX1Q01196 453 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 TAGLNQ01995 201 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 FHL3Q13643 280 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 IGSF11Q5DX21 431 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 IDNKQ5T6J7 187 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 SFXN4Q6P4A7 337 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 Q6ZS49 121 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF491Q8N8L2 437 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 DRAXINQ8NBI3 349 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 MINDY2Q8NBR6 621 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 GINS4Q9BRT9 223 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 OR2D2Q9H210 308 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 SLC35D1Q9NTN3 355 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 DAPK2Q9UIK4 370 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 GAB2Q9UQC2 676 aa10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 FOXA2Q9Y261 457 aaPredicted RBP10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 RBM7Q9Y580 266 aaKnown RBP10.77□□□□□ -0.69
SPTLC1-207ENST00000488921 A0A0B4J203 849 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 A6NHS1 94 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 RAMP3O60896 148 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 OR8U9P0C7N5 309 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 GSTT2P0CG29 244 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 GSTT2BP0CG30 244 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 CD40LGP29965 261 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 RAB9AP51151 201 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 RPS16P62249 146 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 CX3CL1P78423 397 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 SPCS2Q15005 226 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 PSG5Q15238 335 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 NR2C2APQ86WQ0 139 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF383Q8NA42 475 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 OR11H1Q8NG94 326 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 AP3S1Q92572 193 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 SLC25A46Q96AG3 418 aa10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 FLYWCH2Q96CP2 140 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 RBM38Q9H0Z9 239 aaKnown RBP10.76□□□□□ -0.69
SPTLC1-207ENST00000488921 WI2-2373I1.2A0A1W2PRP0 233 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 I3L521 148 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 PROP1O75360 226 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 CA2P00918 260 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 IGKV1-16P04430 117 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF182P17025 639 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 SCAND1P57086 179 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 DGCR2P98153 550 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 PITPNAQ00169 270 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF616Q08AN1 781 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 RTL8BQ17RB0 113 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 AKIRIN2Q53H80 203 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 C19orf54Q5BKX5 351 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 MZT2AQ6P582 158 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF562Q6V9R5 426 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 PPP1R27Q86WC6 154 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 ACOT12Q8WYK0 555 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 MAFIPQ8WZ33 124 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 KLK15Q9H2R5 256 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 GNB4Q9HAV0 340 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms