RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 C5orf52A6NGY3 159 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 F5H0A9 414 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-211ENST00000488912 SLC31A2O15432 143 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 PGLYRP1O75594 196 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-211ENST00000488912 GPX4P36969 197 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF134P52741 427 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 DLX6P56179 175 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 RNF212Q495C1 297 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 LY6G6FQ5SQ64 297 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 GSG1LQ6UXU4 331 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF645Q8N7E2 425 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 ABHD14BQ96IU4 210 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 RPUSD1Q9UJJ7 312 aaKnown RBP8.98□□□□□ -0.97
COL21A1-211ENST00000488912 KCNIP3Q9Y2W7 256 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 POLQO75417 2590 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
COL21A1-211ENST00000488912 ABCA12Q86UK0 2595 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 C3orf85A0A1B0GTC6 90 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 GPR37O15354 613 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 CRYBA1P05813 215 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 ATP5J2P56134 94 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 GNB2P62879 340 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 TMEM187Q14656 261 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 C10orf91Q5T1B1 145 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 HEPN1Q6WQI6 88 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 SVBPQ8N300 66 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 OR5M8Q8NGP6 311 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 OR51H1Q8NH63 302 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 AKR1E2Q96JD6 320 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 PSMG3-AS1Q96PY0 264 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 DMRT1Q9Y5R6 373 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 A0A0B4J2A0 478 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 A0A1W2PPE3 182 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 C22orf46C9J442 243 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 ARPC5O15511 151 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 ADAP1O75689 374 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 PDLIM4P50479 330 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 KRTAP10-9P60411 292 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 TMEM30BQ3MIR4 351 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 FAM74A1Q5RGS3 127 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 PUSL1Q8N0Z8 303 aaKnown RBP8.97□□□□□ -0.97
COL21A1-211ENST00000488912 OR52M1Q8NGK5 317 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 PERPQ96FX8 193 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 ABHD14AQ9BUJ0 271 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 SSBP3Q9BWW4 388 aaPredicted RBP8.97□□□□□ -0.97
COL21A1-211ENST00000488912 SUCNR1Q9BXA5 334 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 ARL6Q9H0F7 186 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 IFI27L2Q9H2X8 130 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 SHPKQ9UHJ6 478 aa8.97□□□□□ -0.97
COL21A1-211ENST00000488912 GCN1Q92616 2671 aaKnown RBP8.96□□□□□ -0.97
COL21A1-211ENST00000488912 F2RP25116 425 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 S100GP29377 79 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 GNG10P50151 68 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 CT45A1Q5HYN5 189 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 BTNL3Q6UXE8 466 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 RBMS3Q6XE24 437 aaKnown RBP8.96□□□□□ -0.97
COL21A1-211ENST00000488912 C11orf42Q8N5U0 333 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 ZNF439Q8NDP4 499 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 OR10A7Q8NGE5 316 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 CT45A3Q8NHU0 189 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 C8orf46Q8TAG6 207 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 MSI2Q96DH6 328 aaKnown RBP8.96□□□□□ -0.97
COL21A1-211ENST00000488912 TMEM68Q96MH6 324 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 TMEM222Q9H0R3 208 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 ZFP57Q9NU63 452 aa8.96□□□□□ -0.97
COL21A1-211ENST00000488912 WNK2Q9Y3S1 2297 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 PPIAL4CA0A0B4J2A2 164 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 H0Y980 276 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 IGHV2-5P01817 119 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 PPIAL4GP0DN37 164 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 HLA-GP17693 338 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 GPR12P47775 334 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 EIF4EBP1Q13541 118 aaPredicted RBP8.96□□□□□ -0.98
COL21A1-211ENST00000488912 LIAT1Q6ZQX7 453 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 FAM168AQ92567 244 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 ZNRD1Q9P1U0 126 aa8.96□□□□□ -0.98
COL21A1-211ENST00000488912 ITGB1BP1O14713 200 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 HOXB5P09067 269 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 HIST2H2BCQ6DN03 193 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 SPAG16Q8N0X2 631 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 ZBTB34Q8NCN2 500 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 CLDND2Q8NHS1 167 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 FAM216AQ8WUB2 273 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 TSNAXQ99598 290 aaKnown RBP8.95□□□□□ -0.98
COL21A1-211ENST00000488912 RAB18Q9NP72 206 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 CARHSP1Q9Y2V2 147 aaKnown RBP8.95□□□□□ -0.98
COL21A1-211ENST00000488912 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
COL21A1-211ENST00000488912 TMEM218A2RU14 115 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 C17orf98A8MV24 154 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 PROP1O75360 226 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 IGHV1-8P0DP01 117 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 ZNF16P17020 682 aaPredicted RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 UCP1P25874 307 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 RAB7AP51149 207 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 DLX1P56177 255 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 RAB5BP61020 215 aa8.94□□□□□ -0.98
COL21A1-211ENST00000488912 SNRPEP62304 92 aaKnown RBP8.94□□□□□ -0.98
COL21A1-211ENST00000488912 MSMO1Q15800 293 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms