RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SOSTQ9BQB4 213 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 C6orf62Q9GZU0 229 aaPredicted RBP14.76□□□□□ -0.05
PTCD3-217ENST00000488801 MTFP1Q9UDX5 166 aa14.76□□□□□ -0.05
PTCD3-217ENST00000488801 RBMX2Q9Y388 322 aaKnown RBP14.76□□□□□ -0.05
PTCD3-217ENST00000488801 CCDC160A6NGH7 325 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 NBR2O15453 112 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 THBS3P49746 956 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 MMDQ15546 238 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 DHRS11Q6UWP2 260 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 OR52I2Q8NH67 350 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 DCUN1D5Q9BTE7 237 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 EHFQ9NZC4 300 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 RABL2AQ9UBK7 228 aaPredicted RBP14.75□□□□□ -0.05
PTCD3-217ENST00000488801 ZNF580Q9UK33 172 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 RABL2BQ9UNT1 228 aa14.75□□□□□ -0.05
PTCD3-217ENST00000488801 NCBP2LA6PVI3 153 aaKnown RBP14.74□□□□□ -0.05
PTCD3-217ENST00000488801 HAX1O00165 279 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 CTDSPLO15194 276 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 HLA-DRB1P01911 266 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 APOA2P02652 100 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 HRH1P35367 487 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 RFX2P48378 723 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 MRPS10P82664 201 aaKnown RBP14.74□□□□□ -0.05
PTCD3-217ENST00000488801 TAGLNQ01995 201 aaKnown RBP14.74□□□□□ -0.05
PTCD3-217ENST00000488801 C5orf64Q2M2E5 130 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 OR5H2Q8NGV7 314 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 SMIM4Q8WVI0 70 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 DIRAS2Q96HU8 199 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 ADTRPQ96IZ2 230 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 HSPB9Q9BQS6 159 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 ZNF107Q9UII5 783 aaPredicted RBP14.74□□□□□ -0.05
PTCD3-217ENST00000488801 RBM7Q9Y580 266 aaKnown RBP14.74□□□□□ -0.05
PTCD3-217ENST00000488801 MGAM2Q2M2H8 2515 aa14.74□□□□□ -0.05
PTCD3-217ENST00000488801 DPPA5A6NC42 116 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 GABARAPH6UMI1 98 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 SPDEFO95238 335 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 IGLV2-23P01705 113 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 DGCR2P98153 550 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 SSBP1Q04837 148 aaKnown RBP14.73□□□□□ -0.05
PTCD3-217ENST00000488801 TMEM177Q53S58 311 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 VAX1Q5SQQ9 334 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 PYHIN1Q6K0P9 492 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 MOB3AQ96BX8 217 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 FXYD6Q9H0Q3 95 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 MMP27Q9H306 513 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 SLC35D1Q9NTN3 355 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 NDUFA13Q9P0J0 144 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 KLK11Q9UBX7 282 aa14.73□□□□□ -0.05
PTCD3-217ENST00000488801 RRHO14718 337 aa14.72□□□□□ -0.05
PTCD3-217ENST00000488801 PMP2P02689 132 aa14.72□□□□□ -0.05
PTCD3-217ENST00000488801 VSIG10L2P0DP72 767 aa14.72□□□□□ -0.05
PTCD3-217ENST00000488801 HLA-DMAP28067 261 aa14.72□□□□□ -0.05
PTCD3-217ENST00000488801 TNFSF8P32971 234 aa14.72□□□□□ -0.05
PTCD3-217ENST00000488801 RPL30P62888 115 aaKnown RBP14.72□□□□□ -0.05
PTCD3-217ENST00000488801 LINC01548A6NM66 108 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 H7C2Y5 167 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 J3QRK9 145 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 KCNAB3O43448 404 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 CD74P04233 296 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 RRASP10301 218 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 TBPP20226 339 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 BRWD1-AS2P59051 145 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 ACTBL2Q562R1 376 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 C9orf152Q5JTZ5 239 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 SLC35E3Q7Z769 313 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 ZBTB34Q8NCN2 500 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 DGCR14Q96DF8 476 aaKnown RBP14.71□□□□□ -0.05
PTCD3-217ENST00000488801 HSD17B10Q99714 261 aaKnown RBP14.71□□□□□ -0.05
PTCD3-217ENST00000488801 RASL11BQ9BPW5 248 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 ZNF2Q9BSG1 426 aaPredicted RBP14.71□□□□□ -0.05
PTCD3-217ENST00000488801 CCL28Q9NRJ3 127 aa14.71□□□□□ -0.05
PTCD3-217ENST00000488801 IGHV7-81A0A0B4J1V7 117 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 GSTZ1O43708 216 aaPredicted RBP14.7□□□□□ -0.06
PTCD3-217ENST00000488801 CRYGBP07316 175 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 CFHR3Q02985 330 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 PSG5Q15238 335 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 ARSJQ5FYB0 599 aaPredicted RBP14.7□□□□□ -0.06
PTCD3-217ENST00000488801 RNASE12Q5GAN4 147 aaKnown RBP14.7□□□□□ -0.06
PTCD3-217ENST00000488801 ZNF66Q6ZN08 573 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 ZNF818PQ6ZRF7 136 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 KCTD9Q7L273 389 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 BVESQ8NE79 360 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 SECTM1Q8WVN6 248 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 FLYWCH2Q96CP2 140 aaKnown RBP14.7□□□□□ -0.06
PTCD3-217ENST00000488801 SLC5A7Q9GZV3 580 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 V9GYH0 126 aa14.7□□□□□ -0.06
PTCD3-217ENST00000488801 ADARB2-AS1A8MUL3 147 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 AP4M1O00189 453 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 FBXO24O75426 580 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 IGF1P05019 195 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 GNRHRP30968 328 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 CRIP2P52943 208 aaPredicted RBP14.69□□□□□ -0.06
PTCD3-217ENST00000488801 FXYD4P59646 89 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 NDPQ00604 133 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 IL18Q14116 193 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 RTL8BQ17RB0 113 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 TCTEX1D4Q5JR98 221 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 C10orf99Q6UWK7 81 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 CCDC190Q86UF4 302 aa14.69□□□□□ -0.06
PTCD3-217ENST00000488801 LHFPL1Q86WI0 220 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms