RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 FAM90A23PA8MXZ1 464 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 K7EIL1 84 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 M0QZK8 103 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 RRHO14718 337 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 SLC22A1O15245 554 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 MOSP00540 346 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 IGHG2P01859 326 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 SCTP09683 121 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 IL3RAP26951 378 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 CALRP27797 417 aaKnown RBP4.61□□□□□ -1.67
CDHR3-213ENST00000488386 CD1BP29016 333 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 TMEM50BP56557 158 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 MMDQ15546 238 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 SSX1Q16384 188 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 RNLSQ5VYX0 342 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 FAM131AQ6UXB0 335 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 SLC16A12Q6ZSM3 486 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 FOXRED2Q8IWF2 684 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 CDH26Q8IXH8 852 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 FAM71E2Q8N5Q1 922 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 MS4A15Q8N5U1 240 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 DRAXINQ8NBI3 349 aaPredicted RBP4.61□□□□□ -1.67
CDHR3-213ENST00000488386 CHPT1Q8WUD6 406 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 MRPS24Q96EL2 167 aaKnown RBP4.61□□□□□ -1.67
CDHR3-213ENST00000488386 ARHGAP5-AS1Q96IT6 56 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 CLCC1Q96S66 551 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 MGLLQ99685 303 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 RASL11BQ9BPW5 248 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 ARPC5LQ9BPX5 153 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 TM2D1Q9BX74 207 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 ANKRD60Q9BZ19 345 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 ABCG5Q9H222 651 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 IFI27L2Q9H2X8 130 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 NECAP2Q9NVZ3 263 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 PLEKHJ1Q9NW61 149 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 KCNIP1Q9NZI2 227 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 JPT1Q9UK76 154 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 RNF150Q9ULK6 438 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 FBXO7Q9Y3I1 522 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 TGP01266 2768 aa4.61□□□□□ -1.67
CDHR3-213ENST00000488386 IGKV1-6A0A0C4DH72 117 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 TMEM272A0A1B0GTI8 110 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 FOXI3A8MTJ6 420 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 J3QRK9 145 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 FCN1O00602 326 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 SLC17A2O00624 439 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 PRYO14603 147 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ATP6V0E1O15342 81 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 LANCL1O43813 399 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 YPEL1O60688 119 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 NAPSAO96009 420 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 UBBP0CG47 229 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ARSBP15848 533 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 SOX6P35712 828 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 CEACAM6P40199 344 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 THBS3P49746 956 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 LUMP51884 338 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ZNF137PP52743 207 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ACTBP60709 375 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 SLC35B1P78383 322 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 HLA-DRB3P79483 266 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 NDPQ00604 133 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 MLLT11Q13015 90 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 TPBGQ13641 420 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 RAB11BQ15907 218 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ECSCRQ19T08 205 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 C2orf76Q3KRA6 126 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 DEFB121Q5J5C9 76 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 C11orf87Q6NUJ2 197 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ZNF880Q6PDB4 577 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 TRAT1Q6PIZ9 186 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ZNF833PQ6ZTB9 187 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 PRSS48Q7RTY5 328 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 C8orf31Q8N9H6 132 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 WFDC9Q8NEX5 89 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 OR2AK2Q8NG84 335 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 OR6M1Q8NGM8 313 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 KCNG3Q8TAE7 436 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 PHYHIPQ92561 330 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 GALMQ96C23 342 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 KCTD7Q96MP8 289 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 YPEL2Q96QA6 119 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ZNF251Q9BRH9 671 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 FAM103A1Q9BTL3 118 aaKnown RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 PECRQ9BY49 303 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ALX4Q9H161 411 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 GNB4Q9HAV0 340 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 PARP11Q9NR21 331 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 LIN7CQ9NUP9 197 aaKnown RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 GHRLQ9UBU3 117 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ZNF230Q9UIE0 474 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ZNF107Q9UII5 783 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 ELF5Q9UKW6 265 aaPredicted RBP4.6□□□□□ -1.67
CDHR3-213ENST00000488386 A3GALT2U3KPV4 340 aa4.6□□□□□ -1.67
CDHR3-213ENST00000488386 IGHV7-81A0A0B4J1V7 117 aa4.59□□□□□ -1.67
CDHR3-213ENST00000488386 NBR2O15453 112 aa4.59□□□□□ -1.67
CDHR3-213ENST00000488386 DENRO43583 198 aaKnown RBP4.59□□□□□ -1.67
CDHR3-213ENST00000488386 CA11O75493 328 aa4.59□□□□□ -1.67
CDHR3-213ENST00000488386 ATP6V1G2O95670 118 aa4.59□□□□□ -1.67
CDHR3-213ENST00000488386 GLAP06280 429 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms