RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CRYGSP22914 178 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ZBTB25P24278 435 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 HSD11B1P28845 292 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 OPRM1P35372 400 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ARR3P36575 388 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 KIR3DL2P43630 455 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 EIF2B2P49770 351 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 GDI2P50395 445 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TAS2R19P59542 299 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 VBP1P61758 197 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 NCS1P62166 190 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 RPS11P62280 158 aaKnown RBP eCLIP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 LSM3P62310 102 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 GRB2P62993 217 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 PSG4Q00888 419 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 FABP5Q01469 135 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF846Q147U1 533 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 GABRA6Q16445 453 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 Q499Y3 187 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ACSM3Q53FZ2 586 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 YIF1BQ5BJH7 314 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 C9orf129Q5T035 196 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM244Q5VVB8 128 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 C22orf42Q6IC83 251 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM91Q6ZNR0 172 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 IQCF2Q8IXL9 164 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 RPRMLQ8N4K4 120 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 C14orf178Q8N769 122 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF433Q8N7K0 673 aaPredicted RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF676Q8N7Q3 588 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 NKAPP1Q8N9T2 125 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ST6GALNAC3Q8NDV1 305 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 OR5B3Q8NH48 314 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 OR5AK2Q8NH90 309 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 DYNC2LI1Q8TCX1 351 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 C7orf33Q8WU49 177 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM203Q969S6 136 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 SPTSSAQ969W0 71 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 C16orf74Q96GX8 76 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 KCTD7Q96MP8 289 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 PDCD1LG2Q9BQ51 273 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TMEM246Q9BRR3 403 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 TMED9Q9BVK6 235 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 SFXN3Q9BWM7 321 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 OR2H1Q9GZK4 316 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 HDHD2Q9H0R4 259 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 OR51J1Q9H342 316 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 SLC25A22Q9H936 323 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 EXOSC4Q9NPD3 245 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 FAM206AQ9NX38 181 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ATPIF1Q9UII2 106 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 OR52A1Q9UKL2 312 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 FBXL3Q9UKT7 428 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 POLR1DQ9Y2S0 133 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 R4GMQ9 66 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 ARHGAP21Q5T5U3 1957 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 LAMA5O15230 3695 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 MAP1BP46821 2468 aaKnown RBP2.9□□□□□ -1.95
PTCD3-216ENST00000487043 PKD1L2Q7Z442 2459 aa2.9□□□□□ -1.95
PTCD3-216ENST00000487043 SVILO95425 2214 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ZZEF1O43149 2961 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 TRAV1-2A0A0B4J238 106 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 TRAV25A0A0B4J276 109 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 CIB4A0PJX0 185 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF879B4DU55 563 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 F5H5K5 113 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 M0R135 149 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ACACBO00763 2458 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 PIN1P1O15428 100 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ARL6IP5O75915 188 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 CDRT1O95170 752 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 IGLV3-1P01715 115 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 HLA-HP01893 362 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 TTRP02766 147 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 SERPINA5P05154 406 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 UCHL1P09936 223 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ACSM4P0C7M7 580 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 UBCP0CG48 685 aaKnown RBP2.89□□□□□ -1.95
PTCD3-216ENST00000487043 CBR1P16152 277 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 SRMP19623 302 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 GABRR1P24046 479 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 STOMP27105 288 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 SDC2P34741 201 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 TGFBR1P36897 503 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 CA7P43166 264 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 NPBWR2P48146 333 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 TFPI2P48307 235 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 SERPINB10P48595 397 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 CX3CR1P49238 355 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 RORCP51449 518 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 DLX1P56177 255 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF121P58317 390 aaPredicted RBP2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ATMQ13315 3056 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 INSL4Q14641 139 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 HIKESHIQ53FT3 197 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 PABPC1L2AQ5JQF8 200 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 DRAM2Q6UX65 266 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 NAA40Q86UY6 237 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 C17orf78Q8N4C9 275 aa2.89□□□□□ -1.95
PTCD3-216ENST00000487043 ZNF283Q8N7M2 679 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms