RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 MYO9AB2RTY4 2548 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 HMX3A6NHT5 357 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 SIX6O95475 246 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 ARG1P05089 322 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 H2BFSP57053 126 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 ZNF66Q6ZN08 573 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 TCTEX1D2Q8WW35 142 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 LHX4Q969G2 390 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 PHB2Q99623 299 aa11.78□□□□□ -0.52
LRIF1-202ENST00000485275 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
LRIF1-202ENST00000485275 GOSR2O14653 212 aa11.77□□□□□ -0.52
LRIF1-202ENST00000485275 TOR1AO14656 332 aa11.77□□□□□ -0.52
LRIF1-202ENST00000485275 DYNAPQ8N1N2 210 aa11.77□□□□□ -0.52
LRIF1-202ENST00000485275 C18orf12Q96KH6 178 aa11.77□□□□□ -0.52
LRIF1-202ENST00000485275 TMEM56Q96MV1 263 aa11.77□□□□□ -0.52
LRIF1-202ENST00000485275 LIN7CQ9NUP9 197 aaKnown RBP11.77□□□□□ -0.52
LRIF1-202ENST00000485275 MGAT4CQ9UBM8 478 aa11.77□□□□□ -0.52
LRIF1-202ENST00000485275 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.52
LRIF1-202ENST00000485275 NOTCH2Q04721 2471 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 TRAV20A0A0B4J274 112 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 A0A0B4J2A0 478 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 CENPVL3A0A0U1RRI6 287 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 CDS2O95674 445 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 TRAPPC2P0DI81 140 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 TRAPPC2BP0DI82 140 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 LYZL2Q7Z4W2 148 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 SLC35G3Q8N808 338 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 LRTM2Q8N967 370 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 ST6GAL2Q96JF0 529 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 NABP2Q9BQ15 211 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 HEXA-AS1Q9H8Q6 139 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 SHPKQ9UHJ6 478 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 TEX15Q9BXT5 2789 aa11.77□□□□□ -0.53
LRIF1-202ENST00000485275 FLNBO75369 2602 aaKnown RBP11.76□□□□□ -0.53
LRIF1-202ENST00000485275 ABCA1O95477 2261 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 TRAV40A0A0B4J280 105 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 S1PR2O95136 353 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 ANXA3P12429 323 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 PRRX1P54821 245 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 CD83Q01151 205 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 ZNF816Q0VGE8 651 aaPredicted RBP11.76□□□□□ -0.53
LRIF1-202ENST00000485275 CATR1Q13166 79 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 TMEM268Q5VZI3 342 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 RUSC1-AS1Q66K80 236 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 FAM71F2Q6NXP2 309 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 SELENOHQ8IZQ5 122 aaKnown RBP11.76□□□□□ -0.53
LRIF1-202ENST00000485275 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 COQ8AQ8NI60 647 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
LRIF1-202ENST00000485275 S1PR3Q99500 378 aa11.76□□□□□ -0.53
LRIF1-202ENST00000485275 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
LRIF1-202ENST00000485275 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
LRIF1-202ENST00000485275 A0A1W2PPI3 338 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 FCGR3BO75015 233 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 TGFAP01135 160 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 IGKV1-16P04430 117 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 HOXB5P09067 269 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 S100GP29377 79 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 FBLN7Q53RD9 439 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 KLF17Q5JT82 389 aaPredicted RBP11.75□□□□□ -0.53
LRIF1-202ENST00000485275 FAM219AQ8IW50 185 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 C7orf69Q9H7B7 122 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 ITGB1BP2Q9UKP3 347 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 AUP1Q9Y679 476 aa11.75□□□□□ -0.53
LRIF1-202ENST00000485275 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 H0YJW9 148 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 SMAD7O15105 426 aaKnown RBP11.74□□□□□ -0.53
LRIF1-202ENST00000485275 IGKV1-5P01602 117 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 THBS3P49746 956 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 UBE2E1P51965 193 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 TPTE2P1Q5T6R2 138 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 TGIF2LXQ8IUE1 241 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 OR10C1Q96KK4 312 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 IGHV3-72A0A0B4J1Y9 119 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 G3V3Q6 166 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 HLA-GP17693 338 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 HTR1DP28221 377 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 SAA4P35542 130 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 LPAR6P43657 344 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 IZUMO4Q1ZYL8 232 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 GGNBP1Q5YKI7 109 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 AKAP14Q86UN6 197 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 LGI3Q8N145 548 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 OR5AN1Q8NGI8 311 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 RBPMSQ93062 196 aaKnown RBP11.74□□□□□ -0.53
LRIF1-202ENST00000485275 HILPDAQ9Y5L2 63 aa11.74□□□□□ -0.53
LRIF1-202ENST00000485275 SOX21Q9Y651 276 aaPredicted RBP11.74□□□□□ -0.53
LRIF1-202ENST00000485275 IGHV1-3A0A0C4DH29 117 aa11.73□□□□□ -0.53
LRIF1-202ENST00000485275 SMLR1H3BR10 107 aa11.73□□□□□ -0.53
LRIF1-202ENST00000485275 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
LRIF1-202ENST00000485275 CCNKO75909 580 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms