RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 C11orf54Q9H0W9 315 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 GHITMQ9H3K2 345 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 C12orf4Q9NQ89 552 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 NDUFB11Q9NX14 153 aa11.8□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TRBV6-6A0A0A6YYG2 114 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ITGB1BP1O14713 200 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CA2P00918 260 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ARSBP15848 533 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CD40LGP29965 261 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TPPP2P59282 170 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 PITPNAQ00169 270 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 PSG5Q15238 335 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SSX1Q16384 188 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ACTBL2Q562R1 376 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CD200R1LQ6Q8B3 271 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 OR6Q1Q8NGQ2 317 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 AGMATQ9BSE5 352 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ZNF221Q9UK13 617 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 MGAT4AQ9UM21 535 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 NUBP2Q9Y5Y2 271 aa11.79□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SLC17A2O00624 439 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 SCTP09683 121 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 OR8U9P0C7N5 309 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 IGHV4-30-4P0DP06 118 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 FABP5Q01469 135 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 RAB11BQ15907 218 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 GRPEL2Q8TAA5 225 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 FLYWCH2Q96CP2 140 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TSNAXQ99598 290 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 GFI1Q99684 422 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 RNF5Q99942 180 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 CMSS1Q9BQ75 279 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 Q9N2K0 584 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 TPSG1Q9NRR2 321 aa11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 AK6Q9Y3D8 172 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-208ENST00000484729 ARL6IP5O75915 188 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SPDEFO95238 335 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 APOA2P02652 100 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 HSPB1P04792 205 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TFAP2AP05549 437 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CD37P11049 281 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RPS16P62249 146 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 AKIRIN2Q53H80 203 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ACSM6Q6P461 480 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ZNF562Q6V9R5 426 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 HAPLN4Q86UW8 402 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PDPNQ86YL7 162 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 Q8N1Y9 231 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 FAM89BQ8N5H3 189 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ARHGAP5-AS1Q96IT6 56 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 OR4C12Q96R67 309 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SLA2Q9H6Q3 261 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 HSF4Q9ULV5 492 aa11.77□□□□□ -0.53
HLA-DQB1-208ENST00000484729 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 M0R1X1 148 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SLC25A17O43808 307 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TRGV3P03979 118 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 IGKV1-16P04430 117 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SNRPBP14678 240 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CLDN12P56749 244 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 LINC00205P59089 165 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TMEM91Q6ZNR0 172 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ZNF383Q8NA42 475 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PTX4Q96A99 478 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PECRQ9BY49 303 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 C19orf73Q9NVV2 129 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RDH8Q9NYR8 311 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 STUB1Q9UNE7 303 aa11.76□□□□□ -0.53
HLA-DQB1-208ENST00000484729 IGKV1-6A0A0C4DH72 117 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 PROP1O75360 226 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SMIM18P0DKX4 95 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 MYL9P24844 172 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CALRP27797 417 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TMEM50BP56557 158 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 MRPS15P82914 257 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 FXYD3Q14802 87 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 OR56B1Q8NGI3 324 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RHOVQ96L33 236 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 RSRP1Q9BUV0 290 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 MRPS26Q9BYN8 205 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SLC35D1Q9NTN3 355 aa11.75□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TRDV1A0A1B0GX56 115 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 TRDCB7Z8K6 153 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CNIH1O95406 144 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CD36P16671 472 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 C22orf42Q6IC83 251 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 POC5Q8NA72 575 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 FAM3DQ96BQ1 224 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SPATA25Q9BR10 227 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ELOVL1Q9BW60 279 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 SSR3Q9UNL2 185 aa11.74□□□□□ -0.53
HLA-DQB1-208ENST00000484729 LOC100506127A0A0U1RQW1 187 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 C13orf42A0A1B0GVH6 325 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 ARPC1BO15143 372 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 BET1O15155 118 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 FABP7O15540 132 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 CD3GP09693 182 aa11.73□□□□□ -0.53
HLA-DQB1-208ENST00000484729 GALP22466 123 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms