RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 PSG5Q15238 335 aa17.4■□□□□ 0.38
CNTNAP3B-208ENST00000484254 FLYWCH2Q96CP2 140 aaKnown RBP17.4■□□□□ 0.38
CNTNAP3B-208ENST00000484254 TSNAXQ99598 290 aaKnown RBP17.4■□□□□ 0.38
CNTNAP3B-208ENST00000484254 ZFP57Q9NU63 452 aa17.4■□□□□ 0.38
CNTNAP3B-208ENST00000484254 SPDEFO95238 335 aa17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 EIF4EP06730 217 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 PF4V1P10720 104 aa17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ARPC4P59998 168 aa17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 RPS16P62249 146 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 RPL23AP62750 156 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 PLGLAQ15195 96 aa17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ZNF645Q8N7E2 425 aa17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ADTRPQ96IZ2 230 aa17.39■□□□□ 0.37
CNTNAP3B-208ENST00000484254 J3QRK9 145 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ATP6V0E1O15342 81 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 TUSC2O75896 110 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 SLC22A5O76082 557 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 APOA1P02647 267 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 OR5H8P0DN80 308 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 DUTP33316 252 aaKnown RBP17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 FOXE3Q13461 319 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ZNF660Q6AZW8 331 aaPredicted RBP17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 PARP11Q9NR21 331 aa17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 METTL1Q9UBP6 276 aaKnown RBP17.38■□□□□ 0.37
CNTNAP3B-208ENST00000484254 IGKV1D-13A0A0B4J2D9 117 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 FCN1O00602 326 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 IGHG4P01861 327 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ELANEP08246 267 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 IGKV1-13P0DP09 117 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 RRASP10301 218 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 CBX3Q13185 183 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 RTL8BQ17RB0 113 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 RNF152Q8N8N0 203 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 BVESQ8NE79 360 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 DDB2Q92466 427 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 SNAPC3Q92966 411 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 NECAP2Q9NVZ3 263 aa17.37■□□□□ 0.37
CNTNAP3B-208ENST00000484254 MEIS3P1A6NDR6 274 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 FCER2P06734 321 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 LGALS7P47929 136 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 CX3CL1P78423 397 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 TMEM177Q53S58 311 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 CXorf66Q5JRM2 361 aaPredicted RBP17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 OR5AP2Q8NGF4 316 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 AP3S1Q92572 193 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 IFT46Q9NQC8 304 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 RBMX2Q9Y388 322 aaKnown RBP17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 WSB1Q9Y6I7 421 aa17.36■□□□□ 0.37
CNTNAP3B-208ENST00000484254 TRAV41A0A0B4J266 112 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 SMIM31A0A1B0GVY4 71 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 LINC00473A8K010 186 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 G3V318 75 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 HPGDSO60760 199 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 IGLV2-14P01704 120 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 RPLP1P05386 114 aaKnown RBP17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ZNF182P17025 639 aaPredicted RBP17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 PPIFP30405 207 aaKnown RBP17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 SLC6A1P30531 599 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 FCGR2CP31995 323 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 PRSS3P35030 304 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 NDPQ00604 133 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 MZT2AQ6P582 158 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ANAPC10Q9UM13 185 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 NOTCH1P46531 2555 aa17.35■□□□□ 0.37
CNTNAP3B-208ENST00000484254 PLXNB1O43157 2135 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 SLC25A17O43808 307 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 IGLV2-23P01705 113 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 PF4P02776 101 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ELK1P19419 428 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 CRIP2P52943 208 aaPredicted RBP17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 ZNF562Q6V9R5 426 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 WFDC9Q8NEX5 89 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 HARBI1Q96MB7 349 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 CLCC1Q96S66 551 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 FBXO7Q9Y3I1 522 aa17.34■□□□□ 0.37
CNTNAP3B-208ENST00000484254 NUDT19A8MXV4 375 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 SHOXO15266 292 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 AADACP22760 399 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 PSMB8P28062 276 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 DEFA6Q01524 100 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 CDK10Q15131 360 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 C19orf54Q5BKX5 351 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 LCNL1Q6ZST4 164 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 C18orf65Q6ZTR6 163 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 CLVS1Q8IUQ0 354 aaPredicted RBP17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 ZNF695Q8IW36 515 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 MINDY2Q8NBR6 621 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 KLHL30-AS1Q8NEE0 82 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 TPSG1Q9NRR2 321 aa17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 MRPS7Q9Y2R9 242 aaKnown RBP17.33■□□□□ 0.36
CNTNAP3B-208ENST00000484254 CA2P00918 260 aa17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 PPYP01298 95 aa17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 IGLV1-40P01703 118 aa17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 CRYGBP07316 175 aa17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 EGR2P11161 476 aaPredicted RBP17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 NAT1P18440 290 aa17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 CDX1P47902 265 aaPredicted RBP17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 MSMO1Q15800 293 aa17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 SAMD5Q5TGI4 173 aa17.32■□□□□ 0.36
CNTNAP3B-208ENST00000484254 C8orf86Q6ZUL3 223 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms