RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TFF1P04155 84 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 WNT2P09544 360 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 OR8U9P0C7N5 309 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 LYL1P12980 280 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 PVALBP20472 110 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-216ENST00000484087 VDAC1P21796 283 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 F2RP25116 425 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 UCP1P25874 307 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 CD80P33681 288 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 GLIPR1P48060 266 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 P2RX3P56373 397 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 EDDM3BP56851 147 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 EIF5AP63241 154 aaKnown RBP5.71□□□□□ -1.49
BRCA1-216ENST00000484087 LCN2P80188 198 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 HTD2P86397 168 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 RAB32Q13637 225 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 EXOSC2Q13868 293 aaKnown RBP5.71□□□□□ -1.49
BRCA1-216ENST00000484087 GNMTQ14749 295 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 MSMO1Q15800 293 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 C21orf62-AS1Q17RA5 79 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 LYZL2Q7Z4W2 148 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 FOXRED2Q8IWF2 684 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 ZNF645Q8N7E2 425 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 LINC01356Q8N9X3 169 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 OR8U1Q8NH10 309 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 OR1L1Q8NH94 360 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 ANGPTL6Q8NI99 470 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 RBPMSQ93062 196 aaKnown RBP5.71□□□□□ -1.49
BRCA1-216ENST00000484087 SDSLQ96GA7 329 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 C1orf159Q96HA4 380 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 TMEM56Q96MV1 263 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 TP53RKQ96S44 253 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 SHARPINQ9H0F6 387 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 HEXA-AS1Q9H8Q6 139 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 PLEKHA2Q9HB19 425 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 OR2S2Q9NQN1 319 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 TMEM106BQ9NUM4 274 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 TMEM56-RWDD3S4R434 201 aa5.71□□□□□ -1.49
BRCA1-216ENST00000484087 PPIAL4EA0A075B759 164 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 LOC105371242A0A075B767 164 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 TRGV10A0A0A0MS01 117 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 MPTX1A8MV57 137 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 E5RGE8 158 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 F5H0A9 414 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-216ENST00000484087 PPIAL4DF5H284 164 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 K7EPK0 472 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 LGALS8O00214 317 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 TAAR5O14804 337 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 TNFSF12O43508 249 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 PPIAL4FP0DN26 164 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 ZFP36P26651 326 aaKnown RBP5.71□□□□□ -1.5
BRCA1-216ENST00000484087 TMEM30BQ3MIR4 351 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 TEX36Q5VZQ5 186 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 STUMQ69YW2 141 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 LYPD2Q6UXB3 125 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 C5orf24Q7Z6I8 188 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 SELENOHQ8IZQ5 122 aaKnown RBP5.71□□□□□ -1.5
BRCA1-216ENST00000484087 SLC7A5P1Q8MH63 180 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 FGFRL1Q8N441 504 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 FAM71E2Q8N5Q1 922 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 TCTEX1D1Q8N7M0 179 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 SLC35G3Q8N808 338 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 ZNRF1Q8ND25 227 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 DEFB108BQ8NET1 73 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 OR13A1Q8NGR1 328 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 OR51H1Q8NH63 302 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 UBALD1Q8TB05 177 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 SCARB1Q8WTV0 552 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 C22orf15Q8WYQ4 148 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 ABHD14BQ96IU4 210 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 FAM210AQ96ND0 272 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 ZNF471Q9BX82 626 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-216ENST00000484087 TOLLIPQ9H0E2 274 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 MMP26Q9NRE1 261 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 HIF1ANQ9NWT6 349 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 GNG12Q9UBI6 72 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 JPT1Q9UK76 154 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 NSG2Q9Y328 171 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 LSM5Q9Y4Y9 91 aaKnown RBP5.71□□□□□ -1.5
BRCA1-216ENST00000484087 PPIAL4AQ9Y536 164 aa5.71□□□□□ -1.5
BRCA1-216ENST00000484087 hADV38S2A0JD32 116 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 RNF222A6NCQ9 220 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 TMEM178BH3BS89 294 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 WRBO00258 174 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 SIGLEC5O15389 551 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 NDUFA2O43678 99 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 YPEL1O60688 119 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 DEDDO75618 318 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 SPDEFO95238 335 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 GYPAP02724 150 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 MSMBP08118 114 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 SLC25A6P12236 298 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 TPT1P13693 172 aaKnown RBP5.7□□□□□ -1.5
BRCA1-216ENST00000484087 SSTR5P35346 364 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 NKX2-1P43699 371 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-216ENST00000484087 RAB7AP51149 207 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 AKR1C2P52895 323 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 TMEM33P57088 247 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 VAMP2P63027 116 aa5.7□□□□□ -1.5
BRCA1-216ENST00000484087 MRPS11P82912 194 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms