RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 CYYR1Q96J86 154 aa10.6□□□□□ -0.71
LINC00477-201ENST00000483544 PRRG4Q9BZD6 226 aa10.6□□□□□ -0.71
LINC00477-201ENST00000483544 PKIBQ9C010 78 aa10.6□□□□□ -0.71
LINC00477-201ENST00000483544 TMEM9BQ9NQ34 198 aa10.6□□□□□ -0.71
LINC00477-201ENST00000483544 KIAA1456Q9P272 454 aa10.6□□□□□ -0.71
LINC00477-201ENST00000483544 RBFOX2O43251 390 aaKnown RBP eCLIP10.59□□□□□ -0.71
LINC00477-201ENST00000483544 OR7C2O60412 319 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 SLC25A6P12236 298 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 CRYBA4P53673 196 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 OR1C1Q15619 314 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 TCTEX1D4Q5JR98 221 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 ACTL10Q5JWF8 245 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 FER1L6-AS2Q96M78 137 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 CABLES2Q9BTV7 478 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 ATP23Q9Y6H3 246 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 PCSK5Q92824 1860 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 ARHGAP21Q5T5U3 1957 aa10.59□□□□□ -0.71
LINC00477-201ENST00000483544 ANKRD30BLA7E2S9 258 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 KLRC4-KLRK1H3BQV0 150 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 TYMSP04818 313 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 BCL3P20749 454 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 MPLP40238 635 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 CTRLP40313 264 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 HNRNPA3P51991 378 aaKnown RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 BAXQ07812 192 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 RSPO4Q2I0M5 234 aaPredicted RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 SP6Q3SY56 376 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 SPINK14Q6IE38 97 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 TOMM20LQ6UXN7 152 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 ZNF695Q8IW36 515 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 FAM219AQ8IW50 185 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 BTF3L4Q96K17 158 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 POM121L2Q96KW2 1035 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 TTTY12Q9BZ98 90 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 C11orf1Q9H5F2 150 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 NAT8Q9UHE5 227 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 PPP1R3CQ9UQK1 317 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 UBE2J1Q9Y385 318 aaPredicted RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 C5orf49A4QMS7 147 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 ZNF732B4DXR9 585 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 PITX3O75364 302 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 PPIAL4GP0DN37 164 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 ESDP10768 282 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 UCP1P25874 307 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 MDH2P40926 338 aaKnown RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 NKX2-1P43699 371 aaPredicted RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 NPBWR2P48146 333 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 GNG3P63215 75 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 PLGLB1Q02325 96 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 DAZAP2Q15038 168 aaPredicted RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 VAMP3Q15836 100 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 LRRC10Q5BKY1 277 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 ZNF66Q6ZN08 573 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 MOB1BQ7L9L4 216 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 TUSC5Q8IXB3 177 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 FAM110AQ9BQ89 295 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 PLEKHF2Q9H8W4 249 aa10.58□□□□□ -0.72
LINC00477-201ENST00000483544 RCL1Q9Y2P8 373 aaKnown RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 TBL2Q9Y4P3 447 aaKnown RBP10.58□□□□□ -0.72
LINC00477-201ENST00000483544 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 PPIAL4CA0A0B4J2A2 164 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 CD300LBA8K4G0 201 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 NPIPB11E5RHQ5 1161 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 H0Y980 276 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 VDAC1P21796 283 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 TUBG1P23258 451 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 RIPPLY3P57055 190 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 PRAMEF5Q5TYX0 476 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 PRAMEF6Q5VXH4 476 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 ZNF880Q6PDB4 577 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 Q8IYB0 196 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 OR2C3Q8N628 320 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 TMEM251Q8N6I4 163 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 KLHDC1Q8N7A1 406 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 OR5P3Q8WZ94 311 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 SDSLQ96GA7 329 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 SIGLEC12Q96PQ1 595 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 CALHM2Q9HA72 323 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 TUBG2Q9NRH3 451 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 ZNF581Q9P0T4 197 aa10.57□□□□□ -0.72
LINC00477-201ENST00000483544 TRIOO75962 3097 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 SHANK1Q9Y566 2161 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 H0YL77 283 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 SP1P08047 785 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 STAG3L2P0CL84 134 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 TIMP3P35625 211 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 GABRA2P47869 451 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 GPM6AP51674 278 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 P2RY6Q15077 328 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 TDRG1Q3Y452 100 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 SHISA2Q6UWI4 295 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 TBC1D26Q86UD7 250 aa10.56□□□□□ -0.72
LINC00477-201ENST00000483544 CISD2Q8N5K1 135 aaKnown RBP10.56□□□□□ -0.72
LINC00477-201ENST00000483544 GNPNAT1Q96EK6 184 aaPredicted RBP10.56□□□□□ -0.72
LINC00477-201ENST00000483544 MAP1LC3B2A6NCE7 125 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms