RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 BLOC1S1P78537 153 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 TNFRSF9Q07011 255 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 MUC15Q8N387 334 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 OR5C1Q8NGR4 320 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 DDB2Q92466 427 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 PARP11Q9NR21 331 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 MMP26Q9NRE1 261 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.91□□□□□ -0.66
CPNE1-225ENST00000483495 DSCAML1Q8TD84 2053 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 ATRXP46100 2492 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 B8ZZF3 427 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 M0R1X1 148 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 NDUFA2O43678 99 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 MED6O75586 246 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 CST7O76096 145 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 HPRT1P00492 218 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 DANCRP0C864 163 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 KIR2DS2P43631 304 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 DYNLT3P51808 116 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 UBE2KP61086 200 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 CLINT1Q14677 625 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 RPL39P5Q59GN2 51 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 PXDC1Q5TGL8 231 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 IL34Q6ZMJ4 242 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 STX12Q86Y82 276 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 STPG2Q8N412 459 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 LYPD6BQ8NI32 183 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 ZNF251Q9BRH9 671 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
CPNE1-225ENST00000483495 CHD8Q9HCK8 2581 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 MARCH11A6NNE9 402 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 FAM90A9PA6NNJ1 464 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 MMP23AO75900 390 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 PPOXP50336 477 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 RAB5CP51148 216 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 ARHGDIBP52566 201 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 RPL31P62899 125 aaKnown RBP10.9□□□□□ -0.66
CPNE1-225ENST00000483495 ZNF273Q14593 569 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 AARDQ4LEZ3 155 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 C1orf229Q6ZS94 237 aaPredicted RBP10.9□□□□□ -0.66
CPNE1-225ENST00000483495 H2BFWTQ7Z2G1 175 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 LEAP2Q969E1 77 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 GAL3ST2Q9H3Q3 398 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 PRELID3BQ9Y3B1 194 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 TANC2Q9HCD6 1990 aa10.9□□□□□ -0.66
CPNE1-225ENST00000483495 USF3Q68DE3 2245 aa10.9□□□□□ -0.67
CPNE1-225ENST00000483495 SAA2-SAA4A0A096LPE2 208 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 NDUFB3O43676 98 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 FCGR3BO75015 233 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 IGHV3-7P01780 117 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 SAA2P0DJI9 122 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-225ENST00000483495 LRRC10Q5BKY1 277 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 BTNL8Q6UX41 500 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 SLC25A48Q6ZT89 311 aaKnown RBP10.89□□□□□ -0.67
CPNE1-225ENST00000483495 HSD17B11Q8NBQ5 300 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 R3HDM4Q96D70 268 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 TSNAXQ99598 290 aaKnown RBP10.89□□□□□ -0.67
CPNE1-225ENST00000483495 ATP5SQ99766 215 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 RBKSQ9H477 322 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 CTSZQ9UBR2 303 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 ROS1P08922 2347 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 H3BP45 60 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 ZG16O60844 167 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 DFFBO76075 338 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 IAPPP10997 89 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 NFYBP25208 207 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 PJVKQ0ZLH3 352 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 TUSC1Q2TAM9 212 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 HFEQ30201 348 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 PRAMEF5Q5TYX0 476 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM200BQ69YZ2 307 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 HEPN1Q6WQI6 88 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM217Q8N7C4 229 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 SUN5Q8TC36 379 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 S1PR3Q99500 378 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 CACFD1Q9UGQ2 172 aa10.89□□□□□ -0.67
CPNE1-225ENST00000483495 NBEAQ8NFP9 2946 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 DAOP14920 347 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 ATP6V0CP27449 155 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 THBS3P49746 956 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 F2RL1P55085 397 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 MRPS11P82912 194 aaKnown RBP10.88□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM14EPQ6UXP3 125 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 ADTRPQ96IZ2 230 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 ZNF714Q96N38 554 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 NARFLQ9H6Q4 476 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 STRAPQ9Y3F4 350 aaKnown RBP10.88□□□□□ -0.67
CPNE1-225ENST00000483495 ARFGEF3Q5TH69 2177 aa10.88□□□□□ -0.67
CPNE1-225ENST00000483495 ANKHD1Q8IWZ3 2542 aaKnown RBP10.87□□□□□ -0.67
CPNE1-225ENST00000483495 A0A1W2PPE3 182 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 TRIM77I1YAP6 450 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 DVL1O14640 695 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 TMEM267Q0VDI3 215 aaPredicted RBP10.87□□□□□ -0.67
CPNE1-225ENST00000483495 Q6ZRG5 221 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 BPIFCQ8NFQ6 507 aa10.87□□□□□ -0.67
CPNE1-225ENST00000483495 OR4S2Q8NH73 311 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms