RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TMEM65Q6PI78 240 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 OR5H6Q8NGV6 325 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 NUDCD2Q8WVJ2 157 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 FLYWCH2Q96CP2 140 aaKnown RBP9.3□□□□□ -0.92
HMGN1-213ENST00000482192 SLC25A38Q96DW6 304 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 YIPF6Q96EC8 236 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 P2RX4Q99571 388 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 GPR61Q9BZJ8 451 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 SLC35D1Q9NTN3 355 aa9.3□□□□□ -0.92
HMGN1-213ENST00000482192 METTL1Q9UBP6 276 aaKnown RBP9.3□□□□□ -0.92
HMGN1-213ENST00000482192 CCL24O00175 119 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 SSX5O60225 188 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 IGLV1-40P01703 118 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 PRB2P02812 416 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-213ENST00000482192 CRIP2P52943 208 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-213ENST00000482192 LINC00205P59089 165 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 RPS16P62249 146 aaKnown RBP9.29□□□□□ -0.92
HMGN1-213ENST00000482192 CBX3Q13185 183 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 RTL8BQ17RB0 113 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 FOXB2Q5VYV0 432 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 TCTEX1D1Q8N7M0 179 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 MINDY2Q8NBR6 621 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 MYOZ3Q8TDC0 251 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 ABHD5Q8WTS1 349 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 C4orf3Q8WVX3 66 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 RAX2Q96IS3 184 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 MCRIP2Q9BUT9 160 aaKnown RBP9.29□□□□□ -0.92
HMGN1-213ENST00000482192 SPATA2Q9UM82 520 aa9.29□□□□□ -0.92
HMGN1-213ENST00000482192 TRAV18A0A075B6X5 111 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 FCN1O00602 326 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 RRASP10301 218 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 LGALS7P47929 136 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 NDPQ00604 133 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
HMGN1-213ENST00000482192 ECSCRQ19T08 205 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 C19orf54Q5BKX5 351 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 CNIH2Q6PI25 160 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 ZNF562Q6V9R5 426 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 DPF1Q92782 380 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 C5orf30Q96GV9 206 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 ADTRPQ96IZ2 230 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 UBE2E2Q96LR5 201 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 DUX3Q96PT4 197 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 DIABLOQ9NR28 239 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 ANXA10Q9UJ72 324 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 FOXA2Q9Y261 457 aaPredicted RBP9.28□□□□□ -0.92
HMGN1-213ENST00000482192 FBXO7Q9Y3I1 522 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 OR2W1Q9Y3N9 320 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 PLXNB1O43157 2135 aa9.28□□□□□ -0.92
HMGN1-213ENST00000482192 A0A1W2PN81 502 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 TRIM64CA6NLI5 447 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 SLC25A17O43808 307 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 SLC22A5O76082 557 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 CA2P00918 260 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 NFYAP23511 347 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-213ENST00000482192 CHRNA7P36544 502 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 TGFBR1P36897 503 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 RPS19P39019 145 aaKnown RBP9.27□□□□□ -0.93
HMGN1-213ENST00000482192 RAB9AP51151 201 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 LUMP51884 338 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-213ENST00000482192 RAB25P57735 213 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 LSM3P62310 102 aaKnown RBP9.27□□□□□ -0.93
HMGN1-213ENST00000482192 TMEM177Q53S58 311 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 PPP1R27Q86WC6 154 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 ZNF645Q8N7E2 425 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 BVESQ8NE79 360 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 DDB2Q92466 427 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 ARPC1AQ92747 370 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 HARBI1Q96MB7 349 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 CLCC1Q96S66 551 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 KLK15Q9H2R5 256 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 AURKAIP1Q9NWT8 199 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-213ENST00000482192 VSIG4Q9Y279 399 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 A3GALT2U3KPV4 340 aa9.27□□□□□ -0.93
HMGN1-213ENST00000482192 SHOXO15266 292 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 IGLV2-23P01705 113 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 HLA-DQB1P01920 261 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 EGR2P11161 476 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-213ENST00000482192 DUTP33316 252 aaKnown RBP9.26□□□□□ -0.93
HMGN1-213ENST00000482192 ARPC4P59998 168 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 FHL3Q13643 280 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 AKIRIN2Q53H80 203 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 ACTBL2Q562R1 376 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 UBE2NLQ5JXB2 153 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 PYHIN1Q6K0P9 492 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 UNQ5815/PRO19632Q6UWF5 114 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 ZNF491Q8N8L2 437 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 BEST4Q8NFU0 473 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 OR5M8Q8NGP6 311 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 S100A16Q96FQ6 103 aaKnown RBP9.26□□□□□ -0.93
HMGN1-213ENST00000482192 FAM103A1Q9BTL3 118 aaKnown RBP9.26□□□□□ -0.93
HMGN1-213ENST00000482192 FUNDC2Q9BWH2 189 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 AUNIPQ9H7T9 357 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 TPSG1Q9NRR2 321 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 NUBP2Q9Y5Y2 271 aa9.26□□□□□ -0.93
HMGN1-213ENST00000482192 J3QRK9 145 aa9.25□□□□□ -0.93
HMGN1-213ENST00000482192 XRCC3O43542 346 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms