RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 FAM173BQ6P4H8 233 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 LRP11Q86VZ4 500 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 CLDN22Q8N7P3 220 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 ZNF615Q8N8J6 731 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 OR5B17Q8NGF7 314 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 OR2T4Q8NH00 348 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 SCRT1Q9BWW7 348 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 VPS29Q9UBQ0 182 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 CARHSP1Q9Y2V2 147 aaKnown RBP2.11□□□□□ -2.07
UBE2F-221ENST00000480828 LINC00588Q9Y4M8 146 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 TRAPPC1Q9Y5R8 145 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 SHANK2Q9UPX8 1470 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 ARHGAP5Q13017 1502 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.11□□□□□ -2.07
UBE2F-221ENST00000480828 ARHGEF12Q9NZN5 1544 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 FAM135AQ9P2D6 1515 aa2.11□□□□□ -2.07
UBE2F-221ENST00000480828 SCN1AP35498 2009 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 CASKIN1Q8WXD9 1431 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 PPRC1Q5VV67 1664 aaKnown RBP2.1□□□□□ -2.07
UBE2F-221ENST00000480828 A2MP01023 1474 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 CCDC18Q5T9S5 1454 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 IGKV2-28A0A075B6P5 120 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 SMIM9A6NGZ8 99 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 CHP2O43745 196 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 SH2D1AO60880 128 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 IGKV2D-28P01615 120 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 IGLV3-27P01718 113 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 HLA-DQB2P05538 268 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 PFN1P07737 140 aaKnown RBP2.1□□□□□ -2.07
UBE2F-221ENST00000480828 INAFM2P0DMQ5 153 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 CCL1P22362 96 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 OR10J1P30954 320 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 CA7P43166 264 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 RAB5BP61020 215 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 OR8G1Q15617 311 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 KRTAP13-3Q3SY46 172 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 SPIN3Q5JUX0 258 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 C10orf91Q5T1B1 145 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 FAM78BQ5VT40 261 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 SBSNQ6UWP8 590 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 ALKAL1Q6UXT8 129 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 TMEM136Q6ZRR5 245 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 ZNF550Q7Z398 422 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 NIT1Q86X76 327 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 CALHM3Q86XJ0 350 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 BAP18Q8IXM2 172 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 PACRGLQ8N7B6 248 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 OR2T27Q8NH04 317 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 PHOSPHO2Q8TCD6 241 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 SLC35B4Q969S0 331 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 HIST1H2BAQ96A08 127 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 SLC25A44Q96H78 314 aaPredicted RBP2.1□□□□□ -2.07
UBE2F-221ENST00000480828 OR51I2Q9H344 312 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 PKIGQ9Y2B9 76 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 ZNF337Q9Y3M9 751 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 PRRC2AP48634 2157 aaKnown RBP2.1□□□□□ -2.07
UBE2F-221ENST00000480828 CPS1P31327 1500 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 ZMYM4Q5VZL5 1548 aa2.1□□□□□ -2.07
UBE2F-221ENST00000480828 HECW1Q76N89 1606 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 NCOA3Q9Y6Q9 1424 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 LOXHD1Q8IVV2 1947 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 A2ML1A8K2U0 1454 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 TCOF1Q13428 1488 aaKnown RBP2.09□□□□□ -2.07
UBE2F-221ENST00000480828 NLRP1Q9C000 1473 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 BCORL1Q5H9F3 1711 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 LINC00862A6NCI5 91 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 LRCOL1A6NCL2 159 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 LECT2O14960 151 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 SLC25A20O43772 301 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 CNIH1O95406 144 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 NSA2O95478 260 aaKnown RBP2.09□□□□□ -2.07
UBE2F-221ENST00000480828 UCHL3P15374 230 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 OR4D2P58180 307 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 DNLZQ5SXM8 178 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 FAM201AQ5SY85 155 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 ZNF660Q6AZW8 331 aaPredicted RBP2.09□□□□□ -2.07
UBE2F-221ENST00000480828 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
UBE2F-221ENST00000480828 HMGN2P46Q86SG4 172 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 KRT222Q8N1A0 295 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 LRRC25Q8N386 305 aaPredicted RBP2.09□□□□□ -2.07
UBE2F-221ENST00000480828 RNF182Q8N6D2 247 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 OR1L8Q8NGR8 309 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 JOSD2Q8TAC2 188 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 SLC35G5Q96KT7 338 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 TBX5Q99593 518 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 CXorf21Q9HAI6 301 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 ANAPC10Q9UM13 185 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 COQ4Q9Y3A0 265 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 FIS1Q9Y3D6 152 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 PXMP4Q9Y6I8 212 aa2.09□□□□□ -2.07
UBE2F-221ENST00000480828 CFAP74Q9C0B2 1584 aa2.09□□□□□ -2.08
UBE2F-221ENST00000480828 RAPGEF6Q8TEU7 1601 aa2.09□□□□□ -2.08
UBE2F-221ENST00000480828 FLT4P35916 1363 aa2.09□□□□□ -2.08
UBE2F-221ENST00000480828 BAZ2AQ9UIF9 1905 aaKnown RBP2.09□□□□□ -2.08
UBE2F-221ENST00000480828 MED14O60244 1454 aa2.08□□□□□ -2.08
UBE2F-221ENST00000480828 TTC37Q6PGP7 1564 aa2.08□□□□□ -2.08
UBE2F-221ENST00000480828 TRBV24-1A0A075B6N3 115 aa2.08□□□□□ -2.08
UBE2F-221ENST00000480828 IGKV1D-37A0A075B6S9 117 aa2.08□□□□□ -2.08
UBE2F-221ENST00000480828 A0A087WUJ7 227 aa2.08□□□□□ -2.08
UBE2F-221ENST00000480828 GOLGA6L4A6NEF3 574 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms