RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TM2D1Q9BX74 207 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 PECRQ9BY49 303 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 C11orf54Q9H0W9 315 aaPredicted RBP5.5□□□□□ -1.53
COL17A1-205ENST00000480127 ATG5Q9H1Y0 275 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 SLA2Q9H6Q3 261 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 RDH8Q9NYR8 311 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 RAB22AQ9UL26 194 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 DNAH1Q9P2D7 4330 aa5.5□□□□□ -1.53
COL17A1-205ENST00000480127 IGHV4OR15-8A0A075B7B6 117 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 A0A087WW49 117 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 TMEM14DPA8MWL7 114 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ARPC1BO15143 372 aaKnown RBP5.49□□□□□ -1.53
COL17A1-205ENST00000480127 TUSC2O75896 110 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 NDUFA3O95167 84 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 NAPSAO96009 420 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 APELAP0DMC3 54 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 CT45A6P0DMU7 189 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 CT45A5P0DMU8 189 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 CT45A7P0DMV0 189 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 GP9P14770 177 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 SPNP16150 400 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 MAP2K4P45985 399 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 CFHR3Q02985 330 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 MLLT11Q13015 90 aaPredicted RBP5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ARL6IP1Q15041 203 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 PSG5Q15238 335 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 TNXAQ16473 311 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 RPEL1Q2QD12 228 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 C2orf76Q3KRA6 126 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 LY6G6FQ5SQ64 297 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ZFAND6Q6FIF0 208 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 IZUMO2Q6UXV1 221 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ODF3L1Q8IXM7 274 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 POC5Q8NA72 575 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF485Q8NCK3 441 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 DYNLRB2Q8TF09 96 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 MAFIPQ8WZ33 124 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 DLX4Q92988 240 aaPredicted RBP5.49□□□□□ -1.53
COL17A1-205ENST00000480127 RNF5Q99942 180 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ST6GALNAC5Q9BVH7 336 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 LPAR5Q9H1C0 372 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 Q9H521 79 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 RANGRFQ9HD47 186 aaPredicted RBP5.49□□□□□ -1.53
COL17A1-205ENST00000480127 Q9N2K0 584 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF580Q9UK33 172 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 HSF4Q9ULV5 492 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 STUB1Q9UNE7 303 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 MRPS7Q9Y2R9 242 aaKnown RBP5.49□□□□□ -1.53
COL17A1-205ENST00000480127 PRELID3BQ9Y3B1 194 aa5.49□□□□□ -1.53
COL17A1-205ENST00000480127 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
COL17A1-205ENST00000480127 A0A0A6YYD4 124 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 TMEM272A0A1B0GTI8 110 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 H0Y980 276 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 I3L521 148 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 FCN1O00602 326 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 CRYZL1O95825 349 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 IGLV1-40P01703 118 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 IGKV1-16P04430 117 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 RRASP10301 218 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 GNB3P16520 340 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 CD36P16671 472 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 RAB3BP20337 219 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 PSMB9P28065 219 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 PPIFP30405 207 aaKnown RBP5.48□□□□□ -1.53
COL17A1-205ENST00000480127 GNG2P59768 71 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 ARPC4P59998 168 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 NDPQ00604 133 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 RUNX1Q01196 453 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 FABP5Q01469 135 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 TAGLNQ01995 201 aaKnown RBP5.48□□□□□ -1.53
COL17A1-205ENST00000480127 FHL3Q13643 280 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 AKIRIN2Q53H80 203 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 RNLSQ5VYX0 342 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF562Q6V9R5 426 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 ZNF367Q7RTV3 350 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 PRSS48Q7RTY5 328 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 MINDY2Q8NBR6 621 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 BVESQ8NE79 360 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 OR5AN1Q8NGI8 311 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 OR10R2Q8NGX6 335 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 ADTRPQ96IZ2 230 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 CITED4Q96RK1 184 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 TOLLIPQ9H0E2 274 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 PARP12Q9H0J9 701 aaKnown RBP5.48□□□□□ -1.53
COL17A1-205ENST00000480127 FKBP14Q9NWM8 211 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 GAB2Q9UQC2 676 aa5.48□□□□□ -1.53
COL17A1-205ENST00000480127 DNAH7Q8WXX0 4024 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 TRBV6-6A0A0A6YYG2 114 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 SMIM30A4D0T7 59 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 ITGB1BP1O14713 200 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 IFNA6P05013 189 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 FCGR3AP08637 254 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 FRMD6-AS1P0C7T7 363 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 GSTT2P0CG29 244 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 GSTT2BP0CG30 244 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 HIST1H1DP16402 221 aaKnown RBP5.47□□□□□ -1.53
COL17A1-205ENST00000480127 AADACP22760 399 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 MOGAT2Q3SYC2 334 aa5.47□□□□□ -1.53
COL17A1-205ENST00000480127 IGSF11Q5DX21 431 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms