RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ALX4Q9H161 411 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC12-218ENST00000479897 LIN7CQ9NUP9 197 aaKnown RBP10.11□□□□□ -0.79
TRAPPC12-218ENST00000479897 FAM96BQ9Y3D0 163 aa10.11□□□□□ -0.79
TRAPPC12-218ENST00000479897 HILPDAQ9Y5L2 63 aa10.11□□□□□ -0.79
TRAPPC12-218ENST00000479897 MXRA5Q9NR99 2828 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 CRYM-AS1A6NIL9 109 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 LINC00473A8K010 186 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 H0YJW9 148 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 TIMM23O14925 209 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 RBFOX2O43251 390 aaKnown RBP eCLIP10.1□□□□□ -0.794e-6■□□□□ 9
TRAPPC12-218ENST00000479897 PGLYRP1O75594 196 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 RLN1P04808 185 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 PI3P19957 117 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 F2RP25116 425 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 CD1BP29016 333 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 MC5RP33032 325 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 KIR2DS2P43631 304 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 REG1BP48304 166 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 RAG2P55895 527 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 DHODHQ02127 395 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 PHLDA2Q53GA4 152 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 ZNF383Q8NA42 475 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 TMEM230Q96A57 120 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 GALNT14Q96FL9 552 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 BEX2Q9BXY8 128 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 NUDT15Q9NV35 164 aa10.1□□□□□ -0.79
TRAPPC12-218ENST00000479897 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 H0Y980 276 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 ARPC1BO15143 372 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 MPPED1O15442 326 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 TNFSF12O43508 249 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 APOA2P02652 100 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 RRASP10301 218 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 SRD5A1P18405 259 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 BRS3P32247 399 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 RAB13P51153 203 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 RPL30P62888 115 aaKnown RBP10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 EBI3Q14213 229 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 OXA1LQ15070 435 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 LRRC75BQ2VPJ9 315 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 DEFB112Q30KQ8 113 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 TMEM128Q5BJH2 165 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 DHRS7BQ6IAN0 325 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 PLET1Q6UQ28 207 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 TBC1D26Q86UD7 250 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 SLC25A42Q86VD7 318 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 THNSL2Q86YJ6 484 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 PDPNQ86YL7 162 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 BCL6BQ8N143 479 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 MINDY2Q8NBR6 621 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 TCTEX1D2Q8WW35 142 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 MARVELD1Q9BSK0 173 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 NAA60Q9H7X0 242 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 PRELID3BQ9Y3B1 194 aa10.09□□□□□ -0.79
TRAPPC12-218ENST00000479897 PEX14O75381 377 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 CRLF1O75462 422 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 VENTXO95231 258 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 H2AFB2P0C5Z0 115 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 RTL8BQ17RB0 113 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 C11orf88Q6PI97 169 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 Q6YL49 198 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 GLDNQ6ZMI3 551 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMED4Q7Z7H5 227 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 MOB3BQ86TA1 216 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 DRAXINQ8NBI3 349 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 ADAD2Q8NCV1 583 aaKnown RBP10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR4S2Q8NH73 311 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 SLC35D1Q9NTN3 355 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 FLVCR2Q9UPI3 526 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 WASHC3Q9Y3C0 194 aa10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 SOX21Q9Y651 276 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC12-218ENST00000479897 MDFIC2A0A1B0GVS7 189 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 FAM157CP0CG43 387 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 RPA2P15927 270 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 UCP1P25874 307 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 LINC00205P59089 165 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 CBX3Q13185 183 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMEM177Q53S58 311 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 CCBE1Q6UXH8 406 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 SGPP2Q8IWX5 399 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMEM86BQ8N661 226 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 Q8N6K4 173 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR51H1Q8NH63 302 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR5R1Q8NH85 324 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 PIFOQ8TCI5 191 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 CHPT1Q8WUD6 406 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 C22orf15Q8WYQ4 148 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 GPHA2Q96T91 129 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 RNF5Q99942 180 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 COMMD9Q9P000 198 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 POMT1Q9Y6A1 747 aa10.07□□□□□ -0.8
TRAPPC12-218ENST00000479897 TRAV6A0A075B6T7 132 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 TEX13DA0A0J9YY54 714 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 C3orf85A0A1B0GTC6 90 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 PRAF2O60831 178 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms