RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 C11orf54Q9H0W9 315 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-212ENST00000479586 AMBNQ9NP70 447 aa12.89□□□□□ -0.35
HMGN1-212ENST00000479586 OR1A1Q9P1Q5 309 aa12.89□□□□□ -0.35
HMGN1-212ENST00000479586 SNTNA6NMZ2 147 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
HMGN1-212ENST00000479586 APOA2P02652 100 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 OR9G9P0C7N8 305 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 ZNF45Q02386 682 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 ZNF57Q68EA5 555 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-212ENST00000479586 RPL22L1Q6P5R6 122 aaKnown RBP12.88□□□□□ -0.35
HMGN1-212ENST00000479586 SVOPQ8N4V2 548 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 THRSPQ92748 146 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 KRTAP4-5Q9BYR2 181 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 MLXQ9UH92 298 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 DMRT1Q9Y5R6 373 aa12.88□□□□□ -0.35
HMGN1-212ENST00000479586 A0A1B0GVY2 172 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 SAC3D1A6NKF1 404 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 FAM223BA6NKX1 122 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 GYG2O15488 501 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 TUSC2O75896 110 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 LIMS3P0CW19 117 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 LIMS4P0CW20 117 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 CBLN1P23435 193 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 MRGPRG-AS1Q2M3A8 158 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 FAM223AQ8IWN6 122 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 TMEM217Q8N7C4 229 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 OR52I1Q8NGK6 324 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 FAAP24Q9BTP7 215 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 SLC35D1Q9NTN3 355 aa12.87□□□□□ -0.35
HMGN1-212ENST00000479586 TRBV9A0A0B4J1U6 114 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 TRBV5-5A0A0J9YX44 114 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 OR2C1O95371 312 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 GABRB1P18505 474 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 CAPGP40121 348 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 APOC4P55056 127 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 DNAL1Q4LDG9 190 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 CCDC58Q4VC31 144 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 SETD6Q8TBK2 473 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 RNF183Q96D59 192 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
HMGN1-212ENST00000479586 A0A1W2PPK0 400 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 LGALS9O00182 355 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 CEACAM6P40199 344 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 ZIK1Q3SY52 487 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-212ENST00000479586 ZNF880Q6PDB4 577 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 EDARADDQ8WWZ3 215 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 SMIM19Q96E16 107 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 HARBI1Q96MB7 349 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 NEDD4LQ96PU5 975 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 CHMP1AQ9HD42 196 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-212ENST00000479586 ZNF221Q9UK13 617 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 AP4S1Q9Y587 144 aa12.85□□□□□ -0.35
HMGN1-212ENST00000479586 PKD1P98161 4303 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 M0R1X1 148 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 MPPED1O15442 326 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
HMGN1-212ENST00000479586 NAPSAO96009 420 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 ANKRD55Q3KP44 614 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 OR2G6Q5TZ20 316 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 LINC00336Q6ZUF6 198 aa12.84□□□□□ -0.35
HMGN1-212ENST00000479586 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.36
HMGN1-212ENST00000479586 FCGR1AP12314 374 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 CTRB1P17538 263 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 NANOS2P60321 138 aaKnown RBP12.83□□□□□ -0.36
HMGN1-212ENST00000479586 RPS11P62280 158 aaKnown RBP eCLIP12.83□□□□□ -0.36
HMGN1-212ENST00000479586 TNXAQ16473 311 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 BTNL8Q6UX41 500 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 FBLIM1Q8WUP2 373 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 SRSF12Q8WXF0 261 aaKnown RBP12.83□□□□□ -0.36
HMGN1-212ENST00000479586 FBXL17Q9UF56 701 aa12.83□□□□□ -0.36
HMGN1-212ENST00000479586 TRBV5-7A0A0A0MS05 114 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 UBE2CO00762 179 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 OGG1O15527 345 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 OR2J3O76001 311 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 LALBAP00709 142 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 ALPLP05186 524 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 ZBTB25P24278 435 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 ETV1P50549 477 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 Q499Y3 187 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 OR10K2Q6IF99 312 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 MOB1BQ7L9L4 216 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 NECAP1Q8NC96 275 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 CCDC197Q8NCU1 140 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 PTX4Q96A99 478 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 SLC7A6OSQ96CW6 309 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-212ENST00000479586 CENPNQ96H22 339 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-212ENST00000479586 UBQLN2Q9UHD9 624 aa12.82□□□□□ -0.36
HMGN1-212ENST00000479586 EXOSC1Q9Y3B2 195 aaKnown RBP12.82□□□□□ -0.36
HMGN1-212ENST00000479586 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
HMGN1-212ENST00000479586 SHOXO15266 292 aa12.81□□□□□ -0.36
HMGN1-212ENST00000479586 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
HMGN1-212ENST00000479586 HLA-DRB3P79483 266 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms